Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 GNG5P1-201ENST00000255500 204 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 RN7SKP44-201ENST00000363602 316 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 RNU6-1215P-201ENST00000384441 102 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 RPL7P25-201ENST00000404151 721 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 RNU2-8P-201ENST00000410727 190 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AC078974.1-201ENST00000411597 223 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 BX295541.1-201ENST00000417774 250 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC104651.1-201ENST00000427559 735 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 OR4K11P-201ENST00000431829 904 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 RABEPKP1-201ENST00000440529 1026 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 MTND6P13-201ENST00000443510 523 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.94□□□□□ -1.78
NPAS1Q99742 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.94□□□□□ -1.78
NPAS1Q99742 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.94□□□□□ -1.78
NPAS1Q99742 RPS26P15-201ENST00000488067 348 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AL358832.1-201ENST00000497800 389 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.94□□□□□ -1.78
NPAS1Q99742 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 AL592156.1-201ENST00000508758 304 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC017037.2-201ENST00000513850 890 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC090151.1-201ENST00000520784 730 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 HMGN1P28-201ENST00000521340 364 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AP003181.2-201ENST00000528941 181 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC009643.1-201ENST00000532030 391 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AL121603.1-201ENST00000553815 142 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC009101.1-201ENST00000568135 242 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 MIR3913-1-201ENST00000577744 102 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 OR4K8P-201ENST00000578842 1048 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.94□□□□□ -1.78
NPAS1Q99742 SNORD84-203ENST00000584275 78 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.94□□□□□ -1.78
NPAS1Q99742 AC090970.3-201ENST00000612566 866 ntBASIC3.94□□□□□ -1.78
NPAS1Q99742 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPAS1Q99742 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.93□□□□□ -1.78
NPAS1Q99742 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPAS1Q99742 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.93□□□□□ -1.78
NPAS1Q99742 MTND5P33-201ENST00000571250 1450 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPAS1Q99742 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
NPAS1Q99742 AL158163.1-201ENST00000603915 1649 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPAS1Q99742 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPAS1Q99742 RNU6-278P-201ENST00000390945 109 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 SNORD66.1-201ENST00000391230 76 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 RNA5SP239-201ENST00000410218 129 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 RNU2-66P-201ENST00000410650 161 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 Y_RNA.619-201ENST00000410951 90 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC016397.1-201ENST00000412463 242 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 RPS7P15-201ENST00000415804 584 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC119618.1-201ENST00000434191 222 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS1Q99742 USP9YP15-201ENST00000442391 422 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AL121871.1-201ENST00000443413 436 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 RAC1P7-201ENST00000445367 377 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS1Q99742 AL645939.1-201ENST00000453429 797 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.93□□□□□ -1.78
NPAS1Q99742 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS1Q99742 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.93□□□□□ -1.78
NPAS1Q99742 TMED11P-201ENST00000479478 690 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC041039.1-201ENST00000485656 536 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 RN7SL810P-201ENST00000493031 276 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.93□□□□□ -1.78
NPAS1Q99742 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS1Q99742 Y_RNA.672-201ENST00000516289 104 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 RNU6-528P-201ENST00000516926 100 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS1Q99742 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
NPAS1Q99742 AC135001.1-201ENST00000544546 283 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.93□□□□□ -1.78
NPAS1Q99742 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPAS1Q99742 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.93□□□□□ -1.78
NPAS1Q99742 AL356432.3-201ENST00000568952 465 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC099489.2-201ENST00000574976 260 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPAS1Q99742 AC090616.5-202ENST00000582111 297 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC012669.1-201ENST00000603209 283 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AC080078.2-201ENST00000603766 501 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AL365503.1-201ENST00000605247 905 ntBASIC3.93□□□□□ -1.78
NPAS1Q99742 AL158211.4-201ENST00000606988 584 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms