Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 TATDN1P1-201ENST00000414123 891 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 MTND2P16-201ENST00000419987 799 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDX2Q99626 VN1R42P-201ENST00000424651 344 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX2Q99626 HMGB1P48-201ENST00000446155 598 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 MTND2P30-201ENST00000456663 382 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDX2Q99626 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX2Q99626 RN7SKP234-201ENST00000517173 224 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AP003102.1-201ENST00000525638 661 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.93□□□□□ -1.94
CDX2Q99626 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX2Q99626 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX2Q99626 SNRPGP1-201ENST00000553864 222 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AC027104.1-201ENST00000563702 681 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AC010735.1-201ENST00000567305 1026 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX2Q99626 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX2Q99626 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.93□□□□□ -1.94
CDX2Q99626 AL671309.1-201ENST00000603750 544 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AC046143.2-201ENST00000609789 160 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AL163051.2-201ENST00000618976 735 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AC022509.4-201ENST00000621404 572 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CDX2Q99626 MIR7153-201ENST00000637758 57 ntBASIC2.93□□□□□ -1.94
CDX2Q99626 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.93□□□□□ -1.94
CDX2Q99626 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDX2Q99626 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDX2Q99626 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDX2Q99626 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDX2Q99626 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDX2Q99626 AL356057.3-201ENST00000402607 340 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 RN7SKP285-201ENST00000410137 318 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX2Q99626 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX2Q99626 DPH3P2-201ENST00000422618 250 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX2Q99626 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX2Q99626 AC124916.1-201ENST00000444020 547 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX2Q99626 HMGN2P23-201ENST00000456759 269 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.92□□□□□ -1.94
CDX2Q99626 MTND2P31-201ENST00000512602 616 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 RNA5SP445-201ENST00000515889 115 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 RNU6-1102P-201ENST00000516149 96 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX2Q99626 MTND2P26-201ENST00000528255 1029 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 RANP3-201ENST00000530970 276 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.92□□□□□ -1.94
CDX2Q99626 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX2Q99626 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDX2Q99626 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.92□□□□□ -1.94
CDX2Q99626 AC009063.1-201ENST00000563342 702 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX2Q99626 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX2Q99626 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDX2Q99626 AC025811.1-201ENST00000604312 472 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 VN1R9P-201ENST00000614184 867 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.92□□□□□ -1.94
CDX2Q99626 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.92□□□□□ -1.94
CDX2Q99626 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.92□□□□□ -1.94
CDX2Q99626 AL163152.1-201ENST00000642001 374 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 MTCO1P18-201ENST00000455518 1419 ntBASIC2.92□□□□□ -1.94
CDX2Q99626 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDX2Q99626 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CDX2Q99626 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CDX2Q99626 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.91□□□□□ -1.94
CDX2Q99626 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDX2Q99626 SNORD114-1-201ENST00000362705 72 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 SNORA70E-201ENST00000384492 135 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDX2Q99626 AC092745.2-202ENST00000411880 369 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.91□□□□□ -1.94
CDX2Q99626 AL158050.1-201ENST00000416077 457 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.91□□□□□ -1.94
CDX2Q99626 RPS12P18-201ENST00000442381 270 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX2Q99626 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.91□□□□□ -1.94
CDX2Q99626 UQCRHP3-201ENST00000451503 251 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 PTGES3P5-201ENST00000455109 434 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 AC146507.2-201ENST00000460608 476 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 AC146507.1-201ENST00000468335 354 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 AC021205.2-201ENST00000480069 347 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.91□□□□□ -1.94
CDX2Q99626 AC117522.3-201ENST00000507974 584 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 AC008885.2-201ENST00000509506 930 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 ARL2BPP6-201ENST00000512757 439 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 RNU4-60P-201ENST00000517239 135 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 C1DP5-201ENST00000525775 383 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX2Q99626 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX2Q99626 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.91□□□□□ -1.94
CDX2Q99626 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.91□□□□□ -1.94
CDX2Q99626 AL365503.1-201ENST00000605247 905 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.91□□□□□ -1.94
CDX2Q99626 RMST_8.1-201ENST00000610287 165 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 AC022079.2-201ENST00000619739 566 ntBASIC2.91□□□□□ -1.94
CDX2Q99626 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDX2Q99626 AC024595.1-201ENST00000623088 387 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms