Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 HIGD1AP17-201ENST00000554576 276 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.61□□□□□ -1.83
CDCA3Q99618 LLPHP1-201ENST00000603571 367 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 AC103710.3-201ENST00000608157 948 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 TUSC7.1-201ENST00000610969 165 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 AC008083.4-201ENST00000615076 444 ntBASIC3.61□□□□□ -1.83
CDCA3Q99618 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDCA3Q99618 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDCA3Q99618 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDCA3Q99618 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDCA3Q99618 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CDCA3Q99618 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.6□□□□□ -1.83
CDCA3Q99618 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.6□□□□□ -1.83
CDCA3Q99618 TNPO1P3-201ENST00000436471 2662 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.6□□□□□ -1.83
CDCA3Q99618 SNRPEP3-201ENST00000338402 276 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDCA3Q99618 RNU6-1214P-201ENST00000363650 109 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 Y_RNA.311-201ENST00000365068 96 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 RNU1-89P-201ENST00000384592 164 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 MIR124-3-201ENST00000384866 87 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 RNU6-328P-201ENST00000390887 106 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC016769.3-201ENST00000396562 315 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 ARF4P3-201ENST00000397387 509 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 RNU6-757P-201ENST00000410334 100 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.6□□□□□ -1.83
CDCA3Q99618 RPL31P45-201ENST00000419532 356 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AL035410.1-201ENST00000427409 427 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.6□□□□□ -1.83
CDCA3Q99618 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.6□□□□□ -1.83
CDCA3Q99618 SLC31A1P1-201ENST00000451221 567 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.6□□□□□ -1.83
CDCA3Q99618 AC109925.1-201ENST00000478069 331 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 RPL7P18-201ENST00000478965 734 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC004069.2-201ENST00000505438 1114 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.6□□□□□ -1.83
CDCA3Q99618 RNA5SP341-201ENST00000516261 117 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC026407.1-201ENST00000518369 204 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.6□□□□□ -1.83
CDCA3Q99618 OR4R3P-201ENST00000525084 838 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 SLC2A13P1-201ENST00000531560 322 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.6□□□□□ -1.83
CDCA3Q99618 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.6□□□□□ -1.83
CDCA3Q99618 AC125611.1-201ENST00000549563 229 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC008127.2-201ENST00000549925 1075 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.6□□□□□ -1.83
CDCA3Q99618 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.6□□□□□ -1.83
CDCA3Q99618 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.6□□□□□ -1.83
CDCA3Q99618 AC009220.3-201ENST00000604318 586 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC092650.2-201ENST00000619984 902 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC097520.1-201ENST00000624435 385 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.6□□□□□ -1.83
CDCA3Q99618 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDCA3Q99618 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.6□□□□□ -1.83
CDCA3Q99618 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDCA3Q99618 SAGE4P-201ENST00000442271 3381 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 AC005539.1-201ENST00000443768 1479 ntBASIC3.6□□□□□ -1.83
CDCA3Q99618 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AL359893.1-201ENST00000447628 1580 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDCA3Q99618 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.59□□□□□ -1.83
CDCA3Q99618 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDCA3Q99618 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CDCA3Q99618 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDCA3Q99618 RNVU1-3-201ENST00000364313 161 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 RNU1-140P-201ENST00000365040 165 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 RNU6-157P-201ENST00000383957 107 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 TAS2R15P-201ENST00000390674 928 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 EIF5P1-201ENST00000400019 1231 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AL357075.1-201ENST00000404107 726 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 HMGN1P24-201ENST00000412282 298 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 TIMM9P2-201ENST00000419324 266 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AC005517.2-201ENST00000424673 553 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AL365396.1-201ENST00000430854 671 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.59□□□□□ -1.83
CDCA3Q99618 CKS1BP5-201ENST00000434172 273 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AC092427.1-201ENST00000439177 601 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 NANOGNBP1-201ENST00000448444 480 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AC097262.1-201ENST00000452559 548 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AL136097.1-201ENST00000456945 913 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AL139824.2-201ENST00000458731 1095 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 MTCYBP17-201ENST00000503579 789 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AC097462.2-201ENST00000504623 481 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AC104090.1-201ENST00000506341 1171 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.59□□□□□ -1.83
CDCA3Q99618 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.59□□□□□ -1.83
CDCA3Q99618 AC010587.2-201ENST00000511727 448 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.59□□□□□ -1.83
CDCA3Q99618 RNY4P37-201ENST00000516225 96 ntBASIC3.59□□□□□ -1.83
CDCA3Q99618 PDCL2P2-201ENST00000533651 189 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms