Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC090617.10-201ENST00000624308 134 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 AC139713.2-215ENST00000641428 5037 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 SPATA2P1-201ENST00000431223 2055 ntBASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC011155.1-201ENST00000316512 456 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-289P-201ENST00000364093 107 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.231-201ENST00000364358 102 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AL121972.1-201ENST00000402023 252 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AL356057.3-201ENST00000402607 340 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-603P-201ENST00000411403 107 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 ELOCP19-201ENST00000411919 318 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AL606489.2-201ENST00000433886 234 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL17P49-201ENST00000443728 411 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 RPS27P23-201ENST00000487608 251 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 RN7SKP46-201ENST00000515942 234 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 PHBP17-201ENST00000528576 541 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC068446.3-201ENST00000555285 382 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AL355598.1-201ENST00000604169 202 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC112187.2-201ENST00000604345 283 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AL133215.3-201ENST00000609801 448 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AL132822.1-201ENST00000617063 513 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC009237.17-201ENST00000618111 748 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC068831.8-201ENST00000620171 435 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 AC090971.5-201ENST00000621102 293 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 RAD17P1-201ENST00000418130 2042 ntBASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP1Q96SZ6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 Y_RNA.25-201ENST00000362528 102 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU1-83P-201ENST00000363426 164 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 RNU6-1322P-201ENST00000364309 107 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 SNORA4.3-201ENST00000365564 137 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 MIR921-201ENST00000401133 56 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AC245054.2-201ENST00000415639 319 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AC092634.6-201ENST00000418558 192 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 OR1AA1P-201ENST00000419597 916 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 RPS12P10-201ENST00000427031 377 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 RPEP2-201ENST00000432149 701 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AC011998.1-201ENST00000433403 117 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 RPS15AP9-201ENST00000439856 381 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL23AP93-201ENST00000440847 484 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 ST13P14-201ENST00000474095 734 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AC009643.1-201ENST00000532030 391 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 VN1R107P-201ENST00000601784 209 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AC068790.5-201ENST00000602741 355 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 RPL26P30-202ENST00000602923 645 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 SNRPGP17-201ENST00000603780 214 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 AL161734.1-201ENST00000609720 557 ntBASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.74□□□□□ -1.65
CDK5RAP1Q96SZ6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms