Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC091046.2-201ENST00000620775 665 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 CU459211.1-201ENST00000635667 749 ntBASIC3.54□□□□□ -1.84
IFT140Q96RY7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.53□□□□□ -1.84
IFT140Q96RY7 SNORD88.1-201ENST00000408684 91 ntBASIC3.53□□□□□ -1.84
IFT140Q96RY7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.53□□□□□ -1.84
IFT140Q96RY7 AC245517.4-201ENST00000448601 281 ntBASIC3.53□□□□□ -1.84
IFT140Q96RY7 AC233279.1-201ENST00000455300 423 ntBASIC3.53□□□□□ -1.84
IFT140Q96RY7 RPL21P18-201ENST00000469899 480 ntBASIC3.53□□□□□ -1.84
IFT140Q96RY7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.53□□□□□ -1.84
IFT140Q96RY7 HMGB1P41-201ENST00000520234 440 ntBASIC3.53□□□□□ -1.84
IFT140Q96RY7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.53□□□□□ -1.84
IFT140Q96RY7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.53□□□□□ -1.84
IFT140Q96RY7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.53□□□□□ -1.84
IFT140Q96RY7 YWHAEP7-203ENST00000622054 312 ntBASIC3.53□□□□□ -1.84
IFT140Q96RY7 AL160394.1-201ENST00000624765 724 ntBASIC3.53□□□□□ -1.84
IFT140Q96RY7 U6.98-201ENST00000637157 84 ntBASIC3.53□□□□□ -1.84
IFT140Q96RY7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
IFT140Q96RY7 AC107021.2-201ENST00000567714 2095 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.52□□□□□ -1.85
IFT140Q96RY7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.52□□□□□ -1.85
IFT140Q96RY7 RNA5SP270-201ENST00000411361 118 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 EI24P1-201ENST00000416584 867 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.52□□□□□ -1.85
IFT140Q96RY7 MTND5P21-201ENST00000531961 522 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.6-201ENST00000603753 252 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.11-201ENST00000604059 253 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.10-201ENST00000604330 253 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AC008162.1-201ENST00000604718 254 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.1-201ENST00000604752 252 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.2-201ENST00000604983 252 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.5-201ENST00000605253 252 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.4-201ENST00000605279 254 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.12-201ENST00000605291 253 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.8-201ENST00000605353 252 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.9-201ENST00000605428 253 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 AL670379.7-201ENST00000605823 252 ntBASIC3.52□□□□□ -1.85
IFT140Q96RY7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
IFT140Q96RY7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
IFT140Q96RY7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.51□□□□□ -1.85
IFT140Q96RY7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
IFT140Q96RY7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
IFT140Q96RY7 AC007390.1-201ENST00000415722 356 ntBASIC3.51□□□□□ -1.85
IFT140Q96RY7 CEACAMP4-201ENST00000457676 421 ntBASIC3.51□□□□□ -1.85
IFT140Q96RY7 SNORD13-201ENST00000459299 104 ntBASIC3.51□□□□□ -1.85
IFT140Q96RY7 AC017007.3-201ENST00000479865 435 ntBASIC3.51□□□□□ -1.85
IFT140Q96RY7 NAMPTP2-201ENST00000505629 1115 ntBASIC3.51□□□□□ -1.85
IFT140Q96RY7 RNA5SP182-201ENST00000516064 82 ntBASIC3.51□□□□□ -1.85
IFT140Q96RY7 RN7SKP96-201ENST00000516948 297 ntBASIC3.51□□□□□ -1.85
IFT140Q96RY7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.51□□□□□ -1.85
IFT140Q96RY7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.51□□□□□ -1.85
IFT140Q96RY7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
IFT140Q96RY7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
IFT140Q96RY7 AC004520.1-201ENST00000608362 1413 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
IFT140Q96RY7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
IFT140Q96RY7 RNU6-661P-201ENST00000362409 107 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 U8.10-201ENST00000384260 133 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 AL354719.1-201ENST00000406535 843 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 AC009969.1-201ENST00000438726 172 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 TAF9P1-201ENST00000445421 515 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 TAF9P2-201ENST00000454958 515 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 AC005840.1-201ENST00000498412 377 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.5□□□□□ -1.85
IFT140Q96RY7 RNA5SP309-201ENST00000516670 106 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.5□□□□□ -1.85
IFT140Q96RY7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.5□□□□□ -1.85
IFT140Q96RY7 AC091834.1-201ENST00000614543 472 ntBASIC3.5□□□□□ -1.85
IFT140Q96RY7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.5□□□□□ -1.85
IFT140Q96RY7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
IFT140Q96RY7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.5□□□□□ -1.85
IFT140Q96RY7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 AC009237.8-201ENST00000445492 379 ntBASIC3.49□□□□□ -1.85
IFT140Q96RY7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 MIR3683-201ENST00000580847 82 ntBASIC3.49□□□□□ -1.85
IFT140Q96RY7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
IFT140Q96RY7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
IFT140Q96RY7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
IFT140Q96RY7 SNORA25.9-201ENST00000365087 128 ntBASIC3.48□□□□□ -1.85
IFT140Q96RY7 AL118520.1-201ENST00000450770 291 ntBASIC3.48□□□□□ -1.85
IFT140Q96RY7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.48□□□□□ -1.85
IFT140Q96RY7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.48□□□□□ -1.85
IFT140Q96RY7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.48□□□□□ -1.85
IFT140Q96RY7 AMZ2P1-203ENST00000565833 850 ntBASIC3.48□□□□□ -1.85
IFT140Q96RY7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.48□□□□□ -1.85
IFT140Q96RY7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IFT140Q96RY7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IFT140Q96RY7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
IFT140Q96RY7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.48□□□□□ -1.85
IFT140Q96RY7 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
IFT140Q96RY7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms