Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC112198.2-201ENST00000426589 6996 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 RN7SKP235-201ENST00000410662 305 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 CHIAP3-201ENST00000423668 1133 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 OR4K11P-201ENST00000431829 904 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 FTLP19-201ENST00000433300 394 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC073415.1-201ENST00000449240 153 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AL356010.1-201ENST00000456364 102 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 Y_RNA.639-201ENST00000458981 102 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC010326.1-201ENST00000462726 602 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 MTCO2P29-201ENST00000465212 189 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 ST13P14-201ENST00000474095 734 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC005741.1-201ENST00000511094 432 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 Y_RNA.718-201ENST00000517110 102 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 OR4K8P-201ENST00000578842 1048 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 MIR3146-201ENST00000580367 79 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 MIR3124-201ENST00000582636 67 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC021646.1-201ENST00000605469 484 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AL080274.1-201ENST00000605565 220 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC019193.3-201ENST00000609144 554 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC000123.2-201ENST00000623124 461 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 SMG1P7-201ENST00000565246 2704 ntBASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SYNGAP1Q96PV0 AC008079.2-201ENST00000623543 20396 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RNU5E-8P-201ENST00000363502 116 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 Y_RNA.146-201ENST00000363549 102 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-196P-201ENST00000384315 107 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RNA5SP332-201ENST00000391063 115 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RPL7P60-201ENST00000397636 735 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AL161631.1-201ENST00000417933 486 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 CYCSP10-201ENST00000417973 294 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 COX6CP13-201ENST00000428703 226 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC005154.2-201ENST00000438110 379 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RPL7AP61-201ENST00000443410 636 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC245028.2-201ENST00000458673 253 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 Y_RNA.635-201ENST00000459041 101 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RPL23AP56-201ENST00000460778 453 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RPL23AP41-201ENST00000484754 458 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC023424.1-201ENST00000496058 459 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC004062.1-201ENST00000509926 645 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 CYCSP28-201ENST00000534284 321 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-89P-201ENST00000606519 100 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC138965.3-201ENST00000623875 498 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 VPS35P1-201ENST00000563400 1518 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 AP001273.1-201ENST00000624493 3152 ntBASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNGAP1Q96PV0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 CDC27P2-201ENST00000425026 1922 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-1207P-201ENST00000384343 107 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 SNORA70.10-201ENST00000384515 134 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-606P-201ENST00000384721 111 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 RNU6-308P-201ENST00000390957 107 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 CISD1P1-201ENST00000393907 327 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AL035079.1-201ENST00000405210 287 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 U3.32-201ENST00000408116 212 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 Y_RNA.605-201ENST00000410577 105 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AC069213.2-201ENST00000420238 366 ntBASIC5.6□□□□□ -1.51
SYNGAP1Q96PV0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms