Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC024595.1-201ENST00000623088 387 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC027309.3-201ENST00000623419 351 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AC104446.1-201ENST00000613728 1321 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 AL049780.3-201ENST00000624612 1583 ntBASIC3.38□□□□□ -1.87
PKNOX2Q96KN3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 RNA5SP51-201ENST00000364750 119 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 RNU6-198P-201ENST00000384258 104 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 RNU6-443P-201ENST00000384780 107 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 AC007066.1-201ENST00000392902 381 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 UBE2V1P11-201ENST00000411559 285 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 ARPC3P1-201ENST00000437218 533 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 AL513043.1-201ENST00000439124 535 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 ELOCP23-201ENST00000452014 332 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 AC087588.1-201ENST00000462203 316 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 FAM172BP-201ENST00000487497 1089 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 HPRT1P1-201ENST00000509498 657 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 FCF1P8-201ENST00000510322 597 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 RN7SKP122-201ENST00000515923 296 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 AC083923.1-201ENST00000523708 376 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 AC006116.10-201ENST00000591836 581 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 AC015871.2-201ENST00000603605 948 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 KATNBL1P5-201ENST00000605015 517 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 UCA1.1-201ENST00000620952 75 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PKNOX2Q96KN3 MTCO1P18-201ENST00000455518 1419 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 ENSAP3-201ENST00000312710 333 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 RPL32P3-201ENST00000359025 275 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 SNORA68.1-201ENST00000364537 132 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 U8.11-201ENST00000384699 133 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 U8.12-201ENST00000384701 133 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 MTND4LP20-201ENST00000402379 270 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AC092745.2-202ENST00000411880 369 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 UBE2V1P9-201ENST00000414760 368 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 MTND1P23-201ENST00000416931 372 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 RPS29P7-201ENST00000439662 171 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 PGBD4P3-201ENST00000440731 581 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AL500527.1-201ENST00000448532 255 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 BX248409.1-201ENST00000455497 255 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 U8.18-201ENST00000459285 133 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 PLGLA-201ENST00000465668 449 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 RPL7P23-201ENST00000493874 747 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AGGF1P6-201ENST00000569213 976 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AC002487.1-201ENST00000604565 994 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AP002826.1-201ENST00000608835 315 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AC099676.1-201ENST00000608886 657 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AL137847.3-201ENST00000611521 109 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AC090116.1-201ENST00000615679 446 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AC073968.1-201ENST00000618594 637 ntBASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PKNOX2Q96KN3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC009902.3-201ENST00000606235 2172 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 RNU6-1005P-201ENST00000384519 107 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 FAM204CP-201ENST00000424489 642 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 MTCO1P39-201ENST00000426148 480 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC004866.2-201ENST00000438285 481 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 ATP5C1P1-201ENST00000441945 895 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 RPS12P18-201ENST00000442381 270 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AL592437.1-201ENST00000443781 492 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 HSFY6P-201ENST00000445573 403 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms