Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 SCARNA13-201ENST00000516672 275 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 RN7SKP92-201ENST00000517266 244 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AL109766.1-201ENST00000555080 552 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 ANP32BP3-201ENST00000559213 706 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 MTND6P33-201ENST00000571794 183 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC087045.1-201ENST00000605856 382 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 Z98200.1-201ENST00000607298 470 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 OR10AB1P-201ENST00000609613 938 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AL133173.2-201ENST00000614270 90 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC091953.2-201ENST00000623979 160 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 U3.53-201ENST00000628922 216 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 AC092447.10-201ENST00000620607 1652 ntBASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHAMP1Q96JM3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 Y_RNA.263-201ENST00000364659 114 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 RNU6-1226P-201ENST00000384317 107 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 RPS4XP8-201ENST00000402039 771 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 RNU2-8P-201ENST00000410727 190 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AL359704.1-201ENST00000411586 781 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 FDX1P2-201ENST00000450769 375 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AL513533.1-201ENST00000453728 415 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 PMCHL2-203ENST00000457791 237 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC006967.1-201ENST00000467608 589 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 PABPC1P3-201ENST00000469174 459 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC022795.1-201ENST00000473808 480 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 RPL36AP51-201ENST00000487216 318 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 FTH1P24-201ENST00000503502 462 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 RPS27AP18-201ENST00000515536 459 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 CENPUP1-201ENST00000526649 1202 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC123904.3-201ENST00000547218 814 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 SUB1P2-201ENST00000556401 297 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AL359212.1-201ENST00000556608 614 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AL162413.1-201ENST00000603198 110 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC007621.1-201ENST00000604544 437 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AL355472.4-201ENST00000610233 626 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC010133.1-201ENST00000615809 842 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 MIR6891-201ENST00000618788 93 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 AC000123.2-201ENST00000623124 461 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 CYP3A51P-201ENST00000633513 256 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 OR52H1-202ENST00000641796 1061 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 CPHL1P-201ENST00000461341 3407 ntBASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHAMP1Q96JM3 MTND5P28-201ENST00000438005 1594 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 MTND5P33-201ENST00000571250 1450 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 OR52B1P-201ENST00000316506 909 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms