Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 MIR6130-201ENST00000619419 109 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AP005264.7-201ENST00000625003 745 ntBASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SKA1Q96BD8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.09□□□□□ -1.75
SKA1Q96BD8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SKA1Q96BD8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SKA1Q96BD8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SKA1Q96BD8 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SKA1Q96BD8 ZNF807-201ENST00000328088 1707 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SKA1Q96BD8 DEFB108F-201ENST00000344638 222 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 RNU6-289P-201ENST00000364093 107 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AL356421.1-201ENST00000403255 413 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 MIR320C1-201ENST00000408566 88 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 OR5BE1P-201ENST00000425977 939 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 TXNL1P1-201ENST00000429528 554 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 RPL36AP13-201ENST00000457490 317 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 SNORD121B-201ENST00000458838 81 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 U3.44-201ENST00000458938 192 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 RPL7P47-201ENST00000497299 556 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 AL139099.1-201ENST00000497398 403 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 PAICSP4-201ENST00000517543 1253 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 DEFB108D-201ENST00000527787 222 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 MTND1P24-201ENST00000552175 861 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 HSPE1P5-201ENST00000561489 272 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC055876.1-202ENST00000567053 138 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 MIR4474-201ENST00000579189 78 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SKA1Q96BD8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC104662.1-201ENST00000604448 511 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC107952.2-201ENST00000606048 486 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 AC092447.10-201ENST00000620607 1652 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.08□□□□□ -1.76
SKA1Q96BD8 OR5BE1P-202ENST00000641168 1176 ntBASIC4.08□□□□□ -1.76
SKA1Q96BD8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SKA1Q96BD8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SKA1Q96BD8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SKA1Q96BD8 RNU6-1207P-201ENST00000384343 107 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 MIR591-201ENST00000385290 95 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 RPS3AP26-201ENST00000398259 784 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 RPL7AP73-201ENST00000413490 353 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AL592447.1-201ENST00000447592 540 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 MTND1P9-201ENST00000453775 944 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC092754.2-201ENST00000463506 460 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC034236.1-201ENST00000469891 373 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC012181.1-201ENST00000479895 423 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC026801.2-201ENST00000515352 425 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 RN7SKP265-201ENST00000516448 223 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 NARSP2-201ENST00000518524 679 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 ERHP1-201ENST00000523006 310 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 AC234772.3-201ENST00000602277 528 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 AL109653.1-201ENST00000603091 248 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 AL031281.1-201ENST00000604049 488 ntBASIC4.07□□□□□ -1.76
SKA1Q96BD8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms