Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC096745.1-201ENST00000509945 370 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 AC137627.1-201ENST00000545761 289 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 MIR4646-201ENST00000580775 63 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 VN1R84P-201ENST00000593697 235 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 AC025470.1-201ENST00000510053 2032 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 AC140479.2-201ENST00000421567 3130 ntBASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NKX2-3Q8TAU0 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AC026951.1-201ENST00000559530 2459 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 CASC19-204ENST00000641001 2055 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AC134882.1-201ENST00000603738 1676 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-1059P-201ENST00000363752 98 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 RNA5SP234-201ENST00000363916 119 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 SNORA51.6-201ENST00000384151 125 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AL590399.2-201ENST00000427536 309 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 KRT8P51-201ENST00000438938 274 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 HMGB1P4-201ENST00000455362 567 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 RPL21P8-201ENST00000465083 535 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 RPS21P4-201ENST00000487122 248 ntBASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.66□□□□□ -1.34
NKX2-3Q8TAU0 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AL731532.1-201ENST00000623972 4236 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 TTC41P-205ENST00000551270 3963 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 RNA5SP319-201ENST00000362768 119 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 Y_RNA.304-201ENST00000365011 112 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 SNORA56-201ENST00000383966 129 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-317P-201ENST00000384031 107 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 MIR765-201ENST00000390226 114 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-550P-201ENST00000391057 101 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC113412.1-201ENST00000425840 504 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AL645568.3-201ENST00000433683 316 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC068305.1-201ENST00000497406 726 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC074198.2-201ENST00000508153 258 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 RNU6-861P-201ENST00000516745 106 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC106782.4-201ENST00000568264 210 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 RPS29P30-201ENST00000600975 111 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC025574.2-201ENST00000615621 514 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AL365265.1-201ENST00000621045 234 ntBASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.65□□□□□ -1.34
NKX2-3Q8TAU0 TCP11X1-202ENST00000622971 1372 ntBASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 ZNF402P-201ENST00000404435 3100 ntBASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NKX2-3Q8TAU0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NKX2-3Q8TAU0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms