Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU4-91P-201ENST00000364778 135 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 SNORD51-201ENST00000384320 80 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 MIR23B-201ENST00000384832 97 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 MIR124-3-201ENST00000384866 87 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 RN7SKP56-201ENST00000410513 331 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 RPL17P12-201ENST00000413391 526 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC006548.1-201ENST00000427470 102 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 RPL7P52-201ENST00000449200 742 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 HMGB3P22-202ENST00000451823 572 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AL445669.2-201ENST00000454425 421 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 OR6K1P-201ENST00000456766 971 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 snoU109.4-201ENST00000458953 143 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 RAP1BP2-201ENST00000478270 544 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 RNU6-27P-201ENST00000516146 107 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 EEF1B2P4-201ENST00000551398 348 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC083760.1-201ENST00000589621 670 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC010680.3-201ENST00000604215 520 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AL139286.1-201ENST00000604465 483 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC128687.1-201ENST00000605304 619 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AL451086.1-201ENST00000605596 223 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC068276.1-201ENST00000605793 379 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC040168.1-201ENST00000623594 991 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC091925.2-201ENST00000625059 256 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 CR381572.1-201ENST00000625098 102 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC025048.6-202ENST00000627667 438 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC027287.1-201ENST00000553115 1453 ntBASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.7□□□□□ -1.82
BEST3Q8N1M1 AC007390.2-201ENST00000606229 3803 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 RNU5F-6P-201ENST00000362979 116 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 RNU4-24P-201ENST00000364565 139 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 SNORA62.3-201ENST00000365110 153 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 RNU6-744P-201ENST00000365557 107 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 U8.14-201ENST00000390843 143 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AL603766.1-201ENST00000407763 664 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 RSU1P2-202ENST00000437884 485 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 MTCO2P7-201ENST00000446518 666 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 SNRPGP9-201ENST00000456025 225 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 snoU13.8-201ENST00000458890 104 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 RNA5SP269-201ENST00000459032 137 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 RPS4XP10-201ENST00000465034 731 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC006517.1-201ENST00000480485 328 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AP001025.2-201ENST00000490908 477 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC023424.2-201ENST00000493479 777 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC034222.1-201ENST00000494052 532 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 COX7A2P2-201ENST00000505291 250 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC025554.1-201ENST00000505641 188 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC010424.1-201ENST00000506336 297 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 MTND4P2-201ENST00000507767 1203 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC116347.2-201ENST00000514912 523 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 RPL12P22-201ENST00000519073 490 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC091516.1-201ENST00000549191 703 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AL360157.1-201ENST00000565962 87 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.69□□□□□ -1.82
BEST3Q8N1M1 MIR4307-201ENST00000582802 84 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC012065.4-201ENST00000602445 679 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 IGHV3-29-201ENST00000604817 344 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC064872.1-201ENST00000604823 1072 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 AC245389.1-201ENST00000605141 529 ntBASIC3.69□□□□□ -1.82
BEST3Q8N1M1 HMGB1P50-201ENST00000605814 607 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms