Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 LARP7P2-201ENST00000575306 125 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC015917.1-201ENST00000579654 510 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC090616.5-202ENST00000582111 297 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AL162713.1-201ENST00000604480 262 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC012468.1-201ENST00000604888 430 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC124312.4-201ENST00000605533 310 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AL451074.6-201ENST00000608512 729 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 MIR8058-201ENST00000615737 89 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC006386.1-201ENST00000619436 415 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AC013470.4-201ENST00000619978 986 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 C2orf27A-204ENST00000623058 969 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 GDI2P1-201ENST00000429312 1336 ntBASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
C9orf40Q8IXQ3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 RNU1-75P-201ENST00000347264 129 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 Y_RNA.192-201ENST00000363977 102 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL121972.1-201ENST00000402023 252 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 RNU4-78P-201ENST00000410940 126 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 RNU6-55P-201ENST00000411092 107 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 RNU6-954P-201ENST00000411355 107 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC068533.2-201ENST00000411872 306 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC063979.1-201ENST00000415539 377 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 USP9YP11-201ENST00000427537 717 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC092427.1-201ENST00000439177 601 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 SLC31A1P1-201ENST00000451221 567 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 CEACAMP4-201ENST00000457676 421 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 USP9YP25-201ENST00000457708 443 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 snoU13.3-201ENST00000459441 104 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 RPL9P32-201ENST00000464118 620 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 RPL5P23-201ENST00000496040 868 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 HMGB1P28-201ENST00000507778 552 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 RN7SKP289-201ENST00000517244 295 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 RPL21P12-201ENST00000559810 515 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC022662.1-201ENST00000580252 331 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL391001.1-201ENST00000602747 715 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AL355812.1-201ENST00000603215 216 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 DUXAP3-201ENST00000603616 594 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC007179.3-201ENST00000604976 235 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC109809.1-201ENST00000619665 545 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC092650.2-201ENST00000619984 902 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 SNORD39.4-201ENST00000620099 78 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 AC004943.3-201ENST00000624116 600 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 CYP3A51P-201ENST00000633513 256 ntBASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
C9orf40Q8IXQ3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 MTCO1P23-201ENST00000415223 1526 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 MTND5P1-201ENST00000445440 1375 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 RPS7P13-201ENST00000413955 498 ntBASIC3.05□□□□□ -1.92
C9orf40Q8IXQ3 AC012065.2-201ENST00000421295 375 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms