Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS3Q8IXF0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AC107081.3-201ENST00000612715 2034 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 Y_RNA.151-201ENST00000363566 112 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RNU6-1207P-201ENST00000384343 107 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 MIR517A-201ENST00000385001 87 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 MIR625-201ENST00000385047 85 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 MIR130A-201ENST00000385274 89 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RNU2-52P-201ENST00000410680 190 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RPLP0P7-201ENST00000416050 667 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 FTH1P1-201ENST00000437933 532 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RPL21P89-201ENST00000444021 467 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RPS15AP1-201ENST00000457423 391 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RPL21P8-201ENST00000465083 535 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RN7SL222P-201ENST00000476452 299 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AC069499.1-201ENST00000489433 509 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AC072052.1-201ENST00000496556 306 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AL359273.1-201ENST00000510918 627 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 FTH1P21-201ENST00000512179 511 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 RNU5F-8P-201ENST00000515941 111 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AC012339.2-201ENST00000523996 453 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AC025423.5-201ENST00000550230 219 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AL353997.4-201ENST00000586196 166 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AC024940.4-201ENST00000605507 246 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AL118522.2-201ENST00000616045 615 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 ZNF101P1-201ENST00000435701 1720 ntBASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
NPAS3Q8IXF0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 RNU6-61P-201ENST00000365528 109 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 SNORD70.1-201ENST00000391007 85 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 RPL23AP36-201ENST00000413895 458 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 FAR2P4-202ENST00000425399 584 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 RNU7-187P-201ENST00000458985 68 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 RPS23P2-201ENST00000463671 415 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 RPS21P4-201ENST00000487122 248 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 RN7SL808P-201ENST00000496066 299 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AC144568.1-201ENST00000520139 137 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 HMGN2P6-201ENST00000551091 273 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AC233702.2-202ENST00000562547 291 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AMZ2P1-203ENST00000565833 850 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AC009852.2-201ENST00000567898 485 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AC024619.4-201ENST00000580924 316 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AC034102.8-201ENST00000615146 484 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AP001486.3-201ENST00000615334 372 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AC055839.1-201ENST00000634467 498 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AC009643.2-201ENST00000603543 1448 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 AP001148.1-201ENST00000624124 2359 ntBASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
NPAS3Q8IXF0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NPAS3Q8IXF0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms