Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC073850.1-201ENST00000449243 255 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AC245028.2-201ENST00000458673 253 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD5.1-201ENST00000458800 75 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 BX284632.1-201ENST00000478218 541 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AC097486.1-201ENST00000515331 210 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-120P-201ENST00000516077 103 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-1069P-201ENST00000516612 133 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-64P-201ENST00000517119 105 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 OR5D17P-201ENST00000531492 978 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 MIR4311-201ENST00000580794 100 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AL138889.2-201ENST00000603883 242 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AC126915.2-201ENST00000610957 190 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 AC090607.5-201ENST00000615692 224 ntBASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SH3RF1Q7Z6J0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 OR56A5-201ENST00000340110 738 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD62.1-201ENST00000362541 86 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD70.1-201ENST00000391007 85 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-55P-201ENST00000411092 107 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AL354766.1-201ENST00000423396 542 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AL606753.1-201ENST00000427435 87 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AC007967.1-201ENST00000455422 1159 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 RPL39P38-201ENST00000467018 153 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 RPL21P6-201ENST00000479171 504 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 RNA5SP384-201ENST00000516615 116 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 Y_RNA.715-201ENST00000517082 110 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 RNU6-323P-201ENST00000521915 107 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AP003385.6-201ENST00000531603 374 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AL133271.1-201ENST00000538229 291 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 GSTP1P1-201ENST00000548078 319 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AC104687.2-201ENST00000604442 342 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 AL139124.1-201ENST00000609123 421 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 Z95327.2-201ENST00000414579 1873 ntBASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.3□□□□□ -1.4
SH3RF1Q7Z6J0 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 XIAPP3-201ENST00000312918 795 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 Y_RNA.14-201ENST00000362415 103 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 SNORD113-1-201ENST00000365321 69 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 RPL21P1-201ENST00000399532 476 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 RNU2-38P-201ENST00000410856 79 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 RNA5SP107-201ENST00000411358 122 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 RPL21P109-201ENST00000422213 475 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AC073910.1-201ENST00000445047 438 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 CYCSP24-201ENST00000445119 316 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 NOP56P2-201ENST00000447491 769 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AC090686.1-201ENST00000481577 749 ntBASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.29□□□□□ -1.4
SH3RF1Q7Z6J0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms