Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 MTCYBP39-201ENST00000437562 491 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC118469.1-201ENST00000442943 488 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 RPL29P29-201ENST00000448725 423 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC010655.1-201ENST00000449336 292 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC146507.1-201ENST00000468335 354 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 RPL21P103-201ENST00000479921 488 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC093767.1-201ENST00000504523 156 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC106038.2-201ENST00000520706 568 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC106785.1-201ENST00000565935 262 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC099489.2-201ENST00000574976 260 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC103710.3-201ENST00000608157 948 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AL391497.1-201ENST00000608671 547 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AC106028.5-201ENST00000610332 395 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AL357080.1-201ENST00000617394 239 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AL445264.1-201ENST00000621719 171 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 AP000553.6-201ENST00000641242 118 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SYNE3Q6ZMZ3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AL513185.3-201ENST00000433335 1300 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 RNU6-723P-201ENST00000383973 107 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AL121972.1-201ENST00000402023 252 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AL021407.1-201ENST00000404531 386 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 RN7SKP202-201ENST00000410439 330 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC083875.1-201ENST00000419509 405 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 RPL7P30-201ENST00000420888 709 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC244035.1-201ENST00000430042 390 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 SKP1P1-201ENST00000438081 489 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 UBE2D3P4-201ENST00000441973 436 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 KATNBL1P3-201ENST00000443475 909 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 ARPC3P2-201ENST00000457786 533 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 RNU7-170P-201ENST00000459303 61 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 RPL31P50-201ENST00000471002 296 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AP001086.1-201ENST00000494882 321 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC093809.1-201ENST00000509155 340 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC026402.1-201ENST00000513642 170 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 COX6CP8-201ENST00000522620 226 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 OR8L1P-201ENST00000534005 955 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC135279.1-201ENST00000543493 504 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC008011.1-201ENST00000545989 227 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 CENPUP2-201ENST00000555897 1186 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 MAGOH2P-202ENST00000584384 429 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC093227.2-201ENST00000589357 285 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AL590229.1-201ENST00000603497 542 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 AC006927.3-201ENST00000638789 384 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 CEP170P1-201ENST00000502249 4587 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNE3Q6ZMZ3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 RNU6-374P-201ENST00000364146 108 ntBASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 RNU6-339P-201ENST00000384310 107 ntBASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 SOD2P1-201ENST00000396543 562 ntBASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 RPS12P23-201ENST00000419579 400 ntBASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 AL035410.1-201ENST00000427409 427 ntBASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 OR51AB1P-201ENST00000429046 620 ntBASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 MUPP-201ENST00000438111 566 ntBASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNE3Q6ZMZ3 MTCO1P27-201ENST00000448269 226 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms