Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
NHLRC1Q6VVB1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL353746.1-201ENST00000566293 6881 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 FAM133CP-201ENST00000332869 704 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 RNU6-97P-201ENST00000363387 104 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 RN7SKP280-201ENST00000364196 304 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 RNA5SP97-201ENST00000365006 84 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 ZYG11AP1-201ENST00000430329 837 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 SKP1P1-201ENST00000438081 489 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 RAC1P7-201ENST00000445367 377 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL592447.1-201ENST00000447592 540 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL359073.1-201ENST00000448036 403 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 MTCO3P20-201ENST00000454926 688 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 ANKRD26P4-201ENST00000455755 950 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 MEMO1P3-201ENST00000459811 302 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 RPL31P50-201ENST00000471002 296 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 NIPA2P2-201ENST00000496376 1083 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL359273.1-201ENST00000510918 627 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC093677.1-201ENST00000514414 678 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 CYCSP30-201ENST00000546447 172 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 MED28P6-201ENST00000558776 231 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC009101.1-201ENST00000568135 242 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 MIR4474-201ENST00000579189 78 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 BDH2P1-201ENST00000602288 736 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL158042.1-201ENST00000605338 460 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC112220.3-201ENST00000605502 502 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL109618.2-201ENST00000605527 211 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL110115.1-201ENST00000614396 364 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL590099.1-201ENST00000615276 138 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC002076.2-201ENST00000617362 122 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AL353748.2-201ENST00000622148 471 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 AC079228.1-201ENST00000624774 1049 ntBASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NHLRC1Q6VVB1 CUL1P1-201ENST00000509510 2425 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 FAT1P1-201ENST00000406588 507 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 HSPE1P8-201ENST00000406997 288 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 AC002075.2-201ENST00000425207 252 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 AC079780.1-201ENST00000428259 207 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 OR6K5P-201ENST00000447050 945 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 AC006480.1-201ENST00000449887 378 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 SSXP4-201ENST00000451349 245 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 NANOGP10-201ENST00000453325 895 ntBASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.36□□□□□ -1.87
NHLRC1Q6VVB1 BX322784.1-201ENST00000455793 1077 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms