Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNA5SP309-201ENST00000516670 106 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 OR5D17P-201ENST00000531492 978 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 TOMM20P2-201ENST00000540082 421 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 OR4K8P-201ENST00000578842 1048 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 MIR4284-201ENST00000578924 81 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 OR2AS2P-201ENST00000606902 342 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AL031775.1-201ENST00000607014 887 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC091965.4-201ENST00000607691 587 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC093591.3-201ENST00000634516 308 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 AC244205.2-202ENST00000635781 342 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC38Q502W7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC38Q502W7 CCT4P2-201ENST00000233836 1548 ntBASIC4.26□□□□□ -1.73
CCDC38Q502W7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC38Q502W7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC38Q502W7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC38Q502W7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC38Q502W7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC38Q502W7 FRG1BP-201ENST00000278882 761 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 RNU1-14P-201ENST00000362759 152 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 RNU5F-7P-201ENST00000363696 115 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 MIR135A2-201ENST00000384854 100 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AL359704.1-201ENST00000411586 781 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 RPL21P66-201ENST00000426566 466 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC244035.1-201ENST00000430042 390 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC129850.1-201ENST00000436203 508 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC011276.1-201ENST00000469688 323 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC116337.2-201ENST00000477662 156 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC110792.1-201ENST00000491826 472 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC021146.1-201ENST00000511202 716 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC116347.2-201ENST00000514912 523 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 SNORA70.14-201ENST00000516205 110 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 IGKV2-38-201ENST00000517443 247 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 HIGD1AP10-201ENST00000527837 282 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC38Q502W7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC116096.1-201ENST00000566804 2314 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 PIGPP4-201ENST00000584447 307 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 TPMTP1-201ENST00000592307 737 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AL031985.2-201ENST00000600955 480 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AC092653.1-201ENST00000608509 531 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 AL161637.1-201ENST00000622380 412 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 AP005264.7-201ENST00000625003 745 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 MTCO1P9-201ENST00000505577 1534 ntBASIC4.25□□□□□ -1.73
CCDC38Q502W7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC38Q502W7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC38Q502W7 AP002001.2-201ENST00000529025 1469 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 AC009902.3-201ENST00000606235 2172 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC38Q502W7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CCDC38Q502W7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
CCDC38Q502W7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 RPL32P3-201ENST00000359025 275 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 RNU6-600P-201ENST00000362524 99 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 RNU4-21P-201ENST00000362802 126 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 RNU1-132P-201ENST00000364300 164 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 SNORA62-201ENST00000365493 153 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC38Q502W7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC38Q502W7 DUTP6-201ENST00000425573 462 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC38Q502W7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC38Q502W7 AC118469.1-201ENST00000442943 488 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 RPL21P133-201ENST00000443666 476 ntBASIC4.24□□□□□ -1.73
CCDC38Q502W7 GDI2P2-201ENST00000445131 608 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms