Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 AC013262.1-201ENST00000426710 252 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AL512649.1-201ENST00000428997 581 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 MTND4LP10-201ENST00000435146 291 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 TRIM60P18-201ENST00000441518 828 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AL592437.1-201ENST00000443781 492 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1AQ14683 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.74□□□□□ -1.81
SMC1AQ14683 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
SMC1AQ14683 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.74□□□□□ -1.81
SMC1AQ14683 AC092185.1-201ENST00000491371 97 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AC093663.1-201ENST00000497190 394 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.74□□□□□ -1.81
SMC1AQ14683 KCTD9P5-201ENST00000504141 1170 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1AQ14683 AC010265.1-201ENST00000513509 211 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 RNU6-579P-201ENST00000516879 102 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1AQ14683 AP001804.3-201ENST00000525146 880 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1AQ14683 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1AQ14683 TRAV37-201ENST00000553906 342 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 DNAJC19P3-201ENST00000594491 331 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.74□□□□□ -1.81
SMC1AQ14683 MIR7112-201ENST00000616126 65 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 AC110801.1-201ENST00000623590 212 ntBASIC3.74□□□□□ -1.81
SMC1AQ14683 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SMC1AQ14683 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1AQ14683 GDI2P1-201ENST00000429312 1336 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 DBF4P1-201ENST00000412976 1892 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1AQ14683 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1AQ14683 RPS3AP26-201ENST00000398259 784 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AL133264.1-201ENST00000407157 562 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 U3.39-201ENST00000408569 239 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
SMC1AQ14683 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.73□□□□□ -1.81
SMC1AQ14683 AL024507.1-201ENST00000412741 274 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 BX323014.1-201ENST00000412876 237 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1AQ14683 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 SDCBPP2-201ENST00000424643 885 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC241584.1-201ENST00000438469 1241 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.73□□□□□ -1.81
SMC1AQ14683 MTND2P39-201ENST00000457230 764 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 RPL21P8-201ENST00000465083 535 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC091860.1-201ENST00000505723 432 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC006390.1-201ENST00000508068 283 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.73□□□□□ -1.81
SMC1AQ14683 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.73□□□□□ -1.81
SMC1AQ14683 AC026333.2-201ENST00000542164 106 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC023825.1-201ENST00000566704 1030 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC005951.1-201ENST00000576706 485 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.73□□□□□ -1.81
SMC1AQ14683 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1AQ14683 AC068620.3-201ENST00000602749 560 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.73□□□□□ -1.81
SMC1AQ14683 BNIP3P31-201ENST00000604515 566 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC106028.5-201ENST00000610332 395 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 AC008083.4-201ENST00000615076 444 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1AQ14683 SCARNA15.3-201ENST00000626315 122 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 SCARNA4.1-201ENST00000628597 123 ntBASIC3.73□□□□□ -1.81
SMC1AQ14683 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1AQ14683 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1AQ14683 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1AQ14683 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1AQ14683 SRP72P2-201ENST00000344851 1979 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.72□□□□□ -1.81
SMC1AQ14683 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.72□□□□□ -1.81
SMC1AQ14683 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SMC1AQ14683 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SMC1AQ14683 RNU6-839P-201ENST00000363347 108 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SMC1AQ14683 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SMC1AQ14683 RNU6-575P-201ENST00000411326 105 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC1AQ14683 MTATP6P4-201ENST00000427725 675 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AC009969.1-201ENST00000438726 172 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AC000041.1-201ENST00000439655 175 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AL645638.1-201ENST00000440519 361 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC1AQ14683 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.72□□□□□ -1.81
SMC1AQ14683 snoU109.4-201ENST00000458953 143 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 RNA5SP310-201ENST00000459084 116 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.72□□□□□ -1.81
SMC1AQ14683 MTND3P3-201ENST00000505004 126 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AC026412.2-201ENST00000512270 1075 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AC119751.5-201ENST00000514077 770 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 RNU1-103P-201ENST00000516502 125 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.72□□□□□ -1.81
SMC1AQ14683 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC1AQ14683 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.72□□□□□ -1.81
SMC1AQ14683 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.72□□□□□ -1.81
SMC1AQ14683 AP003102.1-201ENST00000525638 661 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AP003066.2-201ENST00000529375 555 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 AP001317.1-201ENST00000531194 960 ntBASIC3.72□□□□□ -1.81
SMC1AQ14683 CYB5AP5-201ENST00000549779 389 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms