Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 AL445189.1-201ENST00000405722 338 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD4Q12950 SSXP9-201ENST00000417503 292 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 HSPE1P1-201ENST00000421494 318 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AL365396.1-201ENST00000430854 671 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 RPEP2-201ENST00000432149 701 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXD4Q12950 DDX39BP2-208ENST00000453923 258 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AC092798.1-201ENST00000458542 409 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 snoU13.8-201ENST00000458890 104 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 MEMO1P3-201ENST00000459811 302 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 RPL7P24-201ENST00000493052 752 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXD4Q12950 AC006499.2-201ENST00000513470 337 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 RNU6-232P-201ENST00000517144 64 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
FOXD4Q12950 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXD4Q12950 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXD4Q12950 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD4Q12950 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXD4Q12950 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXD4Q12950 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD4Q12950 DNAJC8P1-201ENST00000554535 372 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 OR4T1P-201ENST00000554933 911 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 PSMB7P1-201ENST00000556349 514 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AC090888.1-201ENST00000561335 1141 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AC135628.1-201ENST00000568867 534 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AC141257.3-201ENST00000572906 215 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXD4Q12950 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD4Q12950 AL133338.2-201ENST00000604292 736 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AP002360.3-201ENST00000607673 710 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD4Q12950 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD4Q12950 AC019278.1-201ENST00000623516 479 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 AL022578.1-201ENST00000439330 1433 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 SDAD1P2-201ENST00000441308 2028 ntBASIC4.11□□□□□ -1.75
FOXD4Q12950 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD4Q12950 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD4Q12950 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD4Q12950 RNU1-15P-201ENST00000353977 144 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 RNU6-433P-201ENST00000363216 104 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 SNORD116-2-201ENST00000384274 95 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 SNORD116-8-201ENST00000384365 95 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 SNORD116-6-201ENST00000384711 96 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 RNA5SP171-201ENST00000391071 115 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 AC007066.1-201ENST00000392902 381 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 SOD2P1-201ENST00000396543 562 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD4Q12950 VDAC1P9-201ENST00000412766 841 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 RPL7AP73-201ENST00000413490 353 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 TPMTP2-201ENST00000414372 726 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD4Q12950 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD4Q12950 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD4Q12950 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FOXD4Q12950 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD4Q12950 TXNL1P1-201ENST00000429528 554 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 ZYG11AP1-201ENST00000430329 837 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD4Q12950 NDUFB4P6-201ENST00000436819 366 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 MTND1P9-201ENST00000453775 944 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD4Q12950 RNU7-136P-201ENST00000458819 69 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 BZW1P2-201ENST00000473537 826 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD4Q12950 VN1R105P-201ENST00000486595 910 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD4Q12950 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD4Q12950 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD4Q12950 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 MIR2116-201ENST00000517221 80 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD4Q12950 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD4Q12950 HMGB1P14-201ENST00000557424 591 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD4Q12950 AC105224.1-201ENST00000587055 421 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 AC090948.1-201ENST00000607464 549 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 AC024560.3-201ENST00000608482 349 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD4Q12950 AC007546.2-201ENST00000623996 360 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD4Q12950 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD4Q12950 FAM35BP-202ENST00000497389 3337 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD4Q12950 MTND4P16-201ENST00000466108 1367 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD4Q12950 MTCO1P9-201ENST00000505577 1534 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD4Q12950 AC012321.1-201ENST00000561622 1588 ntBASIC4.1□□□□□ -1.75
FOXD4Q12950 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
FOXD4Q12950 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXD4Q12950 UBE3AP2-201ENST00000429033 2259 ntBASIC4.09□□□□□ -1.75
FOXD4Q12950 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
FOXD4Q12950 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
FOXD4Q12950 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXD4Q12950 RNU1-108P-201ENST00000362556 161 ntBASIC4.09□□□□□ -1.75
FOXD4Q12950 RNU6-343P-201ENST00000364709 104 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms