Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 MTCO1P40-201ENST00000574371 625 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 HMGN2P28-201ENST00000606102 262 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AL627309.6-201ENST00000606857 840 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AC120053.1-201ENST00000607706 736 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AC131902.3-201ENST00000611767 581 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 AC078880.5-201ENST00000617845 421 ntBASIC3.09□□□□□ -1.91
SMARCB1Q12824 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.09□□□□□ -1.91
SMARCB1Q12824 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMARCB1Q12824 RNU6-353P-201ENST00000364266 108 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 RNU6-468P-201ENST00000384003 109 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 SNORA46-201ENST00000384762 135 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 PSMA2P3-201ENST00000429685 675 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 RPS24P13-201ENST00000442520 397 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 AL135938.1-201ENST00000443141 297 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 RPL7P52-201ENST00000449200 742 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 OR51B8P-201ENST00000449892 769 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMARCB1Q12824 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 AC119751.5-201ENST00000514077 770 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 RNU5A-7P-201ENST00000515979 116 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 SNORD59.2-201ENST00000516873 68 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 AC011611.5-201ENST00000552477 578 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 VN1R88P-201ENST00000596787 292 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 SNRPGP15-201ENST00000600149 222 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 AC024153.1-201ENST00000603103 365 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 AL109659.3-201ENST00000624985 950 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 AP000720.1-201ENST00000625091 483 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 AL121594.5-201ENST00000631724 573 ntBASIC3.08□□□□□ -1.92
SMARCB1Q12824 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.08□□□□□ -1.92
SMARCB1Q12824 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMARCB1Q12824 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMARCB1Q12824 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCB1Q12824 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCB1Q12824 OR5J1P-201ENST00000313544 939 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AP002784.2-201ENST00000397300 549 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 RPL7P8-201ENST00000411964 730 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 RPL36P19-201ENST00000430744 301 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AL162389.1-201ENST00000449233 177 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 BX248409.1-201ENST00000455497 255 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 RPS17P11-201ENST00000474297 293 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC004924.1-201ENST00000480160 781 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC026801.2-201ENST00000515352 425 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 RN7SKP43-201ENST00000516173 320 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 FAM60DP-201ENST00000524174 632 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC034105.3-201ENST00000565294 442 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC023825.1-201ENST00000566704 1030 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC090079.2-201ENST00000575289 768 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC007566.2-201ENST00000603642 413 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AL033523.1-201ENST00000605153 153 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC013468.1-201ENST00000608680 598 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCB1Q12824 MTCO1P6-201ENST00000481192 1384 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC025263.3-201ENST00000622965 1396 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCB1Q12824 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SMARCB1Q12824 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.07□□□□□ -1.92
SMARCB1Q12824 AC046144.1-201ENST00000478559 1853 ntBASIC3.07□□□□□ -1.92
SMARCB1Q12824 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCB1Q12824 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCB1Q12824 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMARCB1Q12824 RNU6-1151P-201ENST00000384684 107 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AC092638.1-201ENST00000411966 1275 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AC245054.2-201ENST00000415639 319 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.06□□□□□ -1.92
SMARCB1Q12824 AC009237.2-201ENST00000421358 284 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.06□□□□□ -1.92
SMARCB1Q12824 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.06□□□□□ -1.92
SMARCB1Q12824 AC025750.2-201ENST00000442609 450 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AL050341.1-201ENST00000447743 313 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.06□□□□□ -1.92
SMARCB1Q12824 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AL590639.1-201ENST00000456484 337 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
SMARCB1Q12824 AC093801.2-201ENST00000503966 1050 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms