Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR3653-201ENST00000625572 110 ntBASIC3.41□□□□□ -1.86
SCN1BQ07699 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN1BQ07699 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCN1BQ07699 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SCN1BQ07699 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN1BQ07699 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.41□□□□□ -1.86
SCN1BQ07699 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.4□□□□□ -1.86
SCN1BQ07699 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SCN1BQ07699 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SCN1BQ07699 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
SCN1BQ07699 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SCN1BQ07699 AC118273.1-201ENST00000525324 3006 ntBASIC3.4□□□□□ -1.86
SCN1BQ07699 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCN1BQ07699 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SCN1BQ07699 SNORA60-201ENST00000362396 134 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 RNU5A-1-201ENST00000362698 116 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 RNU6-1078P-201ENST00000364522 103 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SCN1BQ07699 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.4□□□□□ -1.87
SCN1BQ07699 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SCN1BQ07699 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 TMEM167AP1-201ENST00000423409 219 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.4□□□□□ -1.87
SCN1BQ07699 HIGD1AP4-201ENST00000430194 280 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SCN1BQ07699 MTND1P32-201ENST00000433043 938 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 BTF3P10-201ENST00000433415 495 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 RNA5SP246-201ENST00000458909 119 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 SNORD11.1-201ENST00000459482 85 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AP001025.2-201ENST00000490908 477 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC091167.1-201ENST00000492017 396 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.4□□□□□ -1.87
SCN1BQ07699 SNORA31.22-201ENST00000517204 135 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.4□□□□□ -1.87
SCN1BQ07699 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC005832.2-201ENST00000538921 1430 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 MIR3921-201ENST00000577308 85 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 MIR5047-201ENST00000579212 100 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AL391001.1-201ENST00000602747 715 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 MIR6076-201ENST00000617521 113 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.4□□□□□ -1.87
SCN1BQ07699 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCN1BQ07699 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.87
SCN1BQ07699 MFSD8-236ENST00000641509 4050 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.4□□□□□ -1.87
SCN1BQ07699 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.4□□□□□ -1.87
SCN1BQ07699 AC011460.1-201ENST00000636268 1834 ntBASIC3.4□□□□□ -1.87
SCN1BQ07699 AC092447.10-201ENST00000620607 1652 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SCN1BQ07699 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SCN1BQ07699 AC087359.1-201ENST00000508335 1740 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SCN1BQ07699 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SCN1BQ07699 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SCN1BQ07699 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SCN1BQ07699 RNU6-114P-201ENST00000384704 105 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 MIR320C1-201ENST00000408566 88 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.39□□□□□ -1.87
SCN1BQ07699 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SCN1BQ07699 PIGPP2-201ENST00000411569 458 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 BX842559.1-201ENST00000419615 532 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN1BQ07699 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SCN1BQ07699 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.39□□□□□ -1.87
SCN1BQ07699 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.39□□□□□ -1.87
SCN1BQ07699 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN1BQ07699 MTCO1P27-201ENST00000448269 226 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 NUTF2P3-201ENST00000448540 384 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.39□□□□□ -1.87
SCN1BQ07699 RPL23AP35-201ENST00000451906 501 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 RN7SL860P-201ENST00000473738 223 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN1BQ07699 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.39□□□□□ -1.87
SCN1BQ07699 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.39□□□□□ -1.87
SCN1BQ07699 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SCN1BQ07699 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.39□□□□□ -1.87
SCN1BQ07699 RNA5SP216-201ENST00000516111 123 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 RNU5A-4P-201ENST00000516588 111 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 RAB9BP1-201ENST00000519581 626 ntBASIC3.39□□□□□ -1.87
SCN1BQ07699 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.39□□□□□ -1.87
SCN1BQ07699 AP001372.4-201ENST00000524889 472 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms