Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AC087283.1-201ENST00000604029 1074 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 AL121932.1-201ENST00000605542 214 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 AC008945.2-201ENST00000606056 604 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 HMGN2P28-201ENST00000606102 262 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 RMST_3.1-201ENST00000611651 109 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 Y_RNA.804-201ENST00000615262 101 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 AC104260.1-201ENST00000616660 539 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.79□□□□□ -1.8
CFHR3Q02985 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CFHR3Q02985 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CFHR3Q02985 MTND5P3-201ENST00000438536 1800 ntBASIC3.79□□□□□ -1.8
CFHR3Q02985 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.79□□□□□ -1.8
CFHR3Q02985 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CFHR3Q02985 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CFHR3Q02985 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.79□□□□□ -1.8
CFHR3Q02985 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CFHR3Q02985 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.78□□□□□ -1.8
CFHR3Q02985 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 HSPE1P11-201ENST00000339579 310 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 RNU6-641P-201ENST00000384006 107 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CFHR3Q02985 AL109755.1-201ENST00000401791 649 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 OR51A5P-201ENST00000415429 942 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 BX510359.2-201ENST00000417920 305 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 RPL21P111-201ENST00000418453 477 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 OR2AS1P-201ENST00000427827 319 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 MED13P1-201ENST00000428342 171 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 NRBF2P3-201ENST00000432731 865 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 MTATP6P16-201ENST00000434543 526 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AL772161.1-201ENST00000439130 476 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.78□□□□□ -1.8
CFHR3Q02985 USP9YP8-201ENST00000441913 500 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 CALM1P1-201ENST00000442082 433 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 DDX3P2-201ENST00000446138 111 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC016696.1-201ENST00000446949 318 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 BTF3P6-201ENST00000448054 499 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 OR1H1P-201ENST00000448731 937 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 CACYBPP2-201ENST00000453625 678 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 RPL36AP13-201ENST00000457490 317 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.78□□□□□ -1.8
CFHR3Q02985 AC114786.4-201ENST00000508771 728 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 OR7H2P-201ENST00000513483 306 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 PHBP17-201ENST00000528576 541 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC005868.1-201ENST00000536421 331 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.78□□□□□ -1.8
CFHR3Q02985 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.78□□□□□ -1.8
CFHR3Q02985 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 AC123904.3-201ENST00000547218 814 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC3.78□□□□□ -1.8
CFHR3Q02985 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.78□□□□□ -1.8
CFHR3Q02985 MIR5699-201ENST00000578903 90 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.78□□□□□ -1.8
CFHR3Q02985 MIR4293-201ENST00000584305 78 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC022726.1-201ENST00000587475 207 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC009994.1-201ENST00000606889 253 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AL603758.1-201ENST00000618654 241 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 AC243312.2-201ENST00000623340 601 ntBASIC3.78□□□□□ -1.8
CFHR3Q02985 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.78□□□□□ -1.8
CFHR3Q02985 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.78□□□□□ -1.8
CFHR3Q02985 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CFHR3Q02985 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.78□□□□□ -1.8
CFHR3Q02985 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CFHR3Q02985 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CFHR3Q02985 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CFHR3Q02985 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CFHR3Q02985 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CFHR3Q02985 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CFHR3Q02985 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CFHR3Q02985 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.77□□□□□ -1.81
CFHR3Q02985 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CFHR3Q02985 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CFHR3Q02985 Y_RNA.86-201ENST00000363020 111 ntBASIC3.77□□□□□ -1.81
CFHR3Q02985 RNU6-1155P-201ENST00000363554 107 ntBASIC3.77□□□□□ -1.81
CFHR3Q02985 RN7SKP103-201ENST00000363848 320 ntBASIC3.77□□□□□ -1.81
CFHR3Q02985 RNU4-48P-201ENST00000365559 182 ntBASIC3.77□□□□□ -1.81
CFHR3Q02985 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CFHR3Q02985 RNU6-606P-201ENST00000384721 111 ntBASIC3.77□□□□□ -1.81
CFHR3Q02985 AL136372.1-201ENST00000403060 228 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms