Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC5Q00444 AL669831.4-202ENST00000590817 238 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 XIAPP1-201ENST00000603162 600 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 AC025588.3-201ENST00000604182 274 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 BX664608.1-201ENST00000610519 487 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 AC104237.2-201ENST00000612456 443 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 TAB3P1-202ENST00000452645 1634 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXC5Q00444 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC5Q00444 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.41□□□□□ -2.02
HOXC5Q00444 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC5Q00444 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXC5Q00444 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
HOXC5Q00444 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC5Q00444 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 RNU6-1226P-201ENST00000384317 107 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HOXC5Q00444 SSXP10-201ENST00000402595 565 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 RNA5SP492-201ENST00000411330 114 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC5Q00444 HSFY1P1-201ENST00000423928 1178 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC5Q00444 AC114973.1-201ENST00000429057 632 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 UBE2V2P3-201ENST00000433562 437 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC5Q00444 CYCSP32-201ENST00000440548 321 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC5Q00444 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC5Q00444 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC5Q00444 RPS23P3-201ENST00000470993 430 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AC015724.1-201ENST00000478577 156 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC5Q00444 RNF138P1-201ENST00000502765 546 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC5Q00444 MTCO3P44-201ENST00000510977 541 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 SNORA31.15-201ENST00000516771 132 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 RNA5SP468-201ENST00000516782 93 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AC019227.1-201ENST00000526902 510 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 HSPE1P20-201ENST00000538133 289 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC5Q00444 GTF2IP8-201ENST00000560687 584 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC5Q00444 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC5Q00444 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC5Q00444 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXC5Q00444 VN1R90P-201ENST00000595717 726 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AL161756.2-201ENST00000604597 246 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AC008962.1-201ENST00000605729 304 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AC004775.1-201ENST00000607389 753 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AL110115.1-201ENST00000614396 364 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AC009032.1-201ENST00000617574 431 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 AP001002.2-201ENST00000625137 386 ntBASIC2.4□□□□□ -2.03
HOXC5Q00444 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXC5Q00444 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC5Q00444 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXC5Q00444 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
HOXC5Q00444 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC5Q00444 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC5Q00444 ZNF734P-201ENST00000419494 1534 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXC5Q00444 SFR1P1-201ENST00000403720 688 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 RNA5SP56-201ENST00000410277 118 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 RNU6-272P-201ENST00000411028 104 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 RPS20P25-201ENST00000412447 352 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AC008280.1-201ENST00000418851 412 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC5Q00444 AC006946.1-201ENST00000429106 328 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.39□□□□□ -2.03
HOXC5Q00444 AC129850.1-201ENST00000436203 508 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AC011816.1-201ENST00000441346 546 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 XKRY2-201ENST00000442362 1093 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 RAB11AP1-201ENST00000442978 646 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC5Q00444 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC5Q00444 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC5Q00444 snoU13.4-201ENST00000458916 104 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AC133134.1-201ENST00000466800 359 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXC5Q00444 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC5Q00444 AC133963.2-201ENST00000513686 578 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 SNORD59.2-201ENST00000516873 68 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 CIR1P1-201ENST00000524055 1133 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AP003385.6-201ENST00000531603 374 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AC092470.1-201ENST00000546187 132 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC5Q00444 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC5Q00444 COX6CP3-201ENST00000580869 223 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 SNORD84-203ENST00000584275 78 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AC017100.2-201ENST00000584628 355 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 BDH2P1-201ENST00000602288 736 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 AC092474.3-201ENST00000603022 568 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.39□□□□□ -2.03
HOXC5Q00444 AL109659.3-201ENST00000624985 950 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC5Q00444 AL590396.2-201ENST00000636511 1041 ntBASIC2.39□□□□□ -2.03
HOXC5Q00444 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HOXC5Q00444 ZNF271P-202ENST00000465539 1970 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms