Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.34□□□□□ -2.19
HSPG2P98160 MIR3683-201ENST00000580847 82 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.34□□□□□ -2.19
HSPG2P98160 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.34□□□□□ -2.19
HSPG2P98160 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.34□□□□□ -2.19
HSPG2P98160 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HSPG2P98160 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
HSPG2P98160 HSP90AA5P-201ENST00000438353 2192 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.34□□□□□ -2.19
HSPG2P98160 RNU6-328P-201ENST00000390887 106 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 SNORA40.18-201ENST00000391200 128 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.34□□□□□ -2.19
HSPG2P98160 RPS7P2-201ENST00000435134 607 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.34□□□□□ -2.19
HSPG2P98160 AF186190.1-201ENST00000517470 480 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.34□□□□□ -2.19
HSPG2P98160 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.34□□□□□ -2.19
HSPG2P98160 AC105137.2-201ENST00000569073 466 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 AL391813.2-201ENST00000609113 322 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 AC005296.1-201ENST00000616145 209 ntBASIC1.34□□□□□ -2.19
HSPG2P98160 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.34□□□□□ -2.19
HSPG2P98160 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.34□□□□□ -2.2
HSPG2P98160 RPL31P1-201ENST00000398116 372 ntBASIC1.34□□□□□ -2.2
HSPG2P98160 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.34□□□□□ -2.2
HSPG2P98160 OR4A45P-201ENST00000529954 901 ntBASIC1.34□□□□□ -2.2
HSPG2P98160 OR4P1P-201ENST00000530808 1136 ntBASIC1.34□□□□□ -2.2
HSPG2P98160 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.34□□□□□ -2.2
HSPG2P98160 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
HSPG2P98160 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.34□□□□□ -2.2
HSPG2P98160 AL020991.1-201ENST00000612314 373 ntBASIC1.34□□□□□ -2.2
HSPG2P98160 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
HSPG2P98160 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HSPG2P98160 MIR1183-201ENST00000408856 89 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 RNU2-22P-201ENST00000411266 212 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.33□□□□□ -2.2
HSPG2P98160 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.33□□□□□ -2.2
HSPG2P98160 MIR5002-201ENST00000584713 97 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 EXOC5P1-201ENST00000510543 1969 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.33□□□□□ -2.2
HSPG2P98160 AC009237.2-201ENST00000421358 284 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.33□□□□□ -2.2
HSPG2P98160 IGLV3-17-201ENST00000519099 244 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 OR7K1P-201ENST00000546439 926 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 MIR5092-201ENST00000583139 88 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 AC022709.1-201ENST00000615967 87 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 CU459211.1-201ENST00000635667 749 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 AC011978.2-201ENST00000569835 2054 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HSPG2P98160 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HSPG2P98160 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
HSPG2P98160 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.33□□□□□ -2.2
HSPG2P98160 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HSPG2P98160 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HSPG2P98160 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.33□□□□□ -2.2
HSPG2P98160 AC007620.3-201ENST00000608131 497 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.33□□□□□ -2.2
HSPG2P98160 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HSPG2P98160 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HSPG2P98160 AL606537.1-201ENST00000607258 2011 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HSPG2P98160 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.33□□□□□ -2.2
HSPG2P98160 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.33□□□□□ -2.2
HSPG2P98160 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.33□□□□□ -2.2
HSPG2P98160 AC233279.1-201ENST00000455300 423 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 AL121594.1-201ENST00000475906 575 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 AL163540.1-201ENST00000485382 386 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.33□□□□□ -2.2
HSPG2P98160 AC002984.1-201ENST00000591692 448 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 AC126118.1-201ENST00000607744 628 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 MIR6895-201ENST00000613497 78 ntBASIC1.33□□□□□ -2.2
HSPG2P98160 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.33□□□□□ -2.2
HSPG2P98160 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HSPG2P98160 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
HSPG2P98160 AL445437.1-201ENST00000623157 3087 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HSPG2P98160 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
HSPG2P98160 KPNA2P1-201ENST00000458289 1591 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HSPG2P98160 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HSPG2P98160 AP000275.1-201ENST00000411943 390 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.32□□□□□ -2.2
HSPG2P98160 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.32□□□□□ -2.2
HSPG2P98160 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.32□□□□□ -2.2
HSPG2P98160 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.32□□□□□ -2.2
HSPG2P98160 AC006116.7-201ENST00000590141 756 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC1.32□□□□□ -2.2
HSPG2P98160 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
HSPG2P98160 RNY1-201ENST00000364228 113 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 SNORA11.4-201ENST00000408823 129 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.32□□□□□ -2.2
HSPG2P98160 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HSPG2P98160 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.32□□□□□ -2.2
HSPG2P98160 USP9YP5-201ENST00000511770 630 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.32□□□□□ -2.2
HSPG2P98160 DNAJC19P9-201ENST00000555084 351 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 MIR4255-201ENST00000579351 72 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 BMS1P7-201ENST00000602440 1052 ntBASIC1.32□□□□□ -2.2
HSPG2P98160 AL645944.1-201ENST00000603857 493 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms