Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC010326.1-201ENST00000462726 602 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 MTCO3P38-201ENST00000468910 766 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AL121769.1-201ENST00000469473 401 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 AC093824.1-201ENST00000508796 343 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 ARL2BPP6-201ENST00000512757 439 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC114797.1-201ENST00000514003 728 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX6-1P78426 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX6-1P78426 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX6-1P78426 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX6-1P78426 AP003072.2-201ENST00000527756 676 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AL512310.1-201ENST00000548639 172 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC234778.2-201ENST00000566241 354 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 AC139792.3-201ENST00000623525 224 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC009161.2-201ENST00000624626 138 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.27□□□□□ -1.73
NKX6-1P78426 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 DHX40P1-201ENST00000588725 1412 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NKX6-1P78426 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 AC099654.2-201ENST00000433031 1980 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX6-1P78426 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 AC138915.3-201ENST00000562908 1389 ntBASIC4.27□□□□□ -1.73
NKX6-1P78426 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
NKX6-1P78426 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX6-1P78426 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX6-1P78426 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX6-1P78426 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AC092435.4-201ENST00000623012 4159 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX6-1P78426 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX6-1P78426 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NKX6-1P78426 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX6-1P78426 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX6-1P78426 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX6-1P78426 AL391684.1-202ENST00000641293 1636 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 SNORD56.2-201ENST00000363242 71 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 Y_RNA.453-201ENST00000384223 109 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 Y_RNA.573-201ENST00000384763 105 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 MIR135A2-201ENST00000384854 100 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 RN7SKP285-201ENST00000410137 318 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 RNU2-43P-201ENST00000410306 190 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 RN7SKP159-201ENST00000410657 292 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 RN7SKP27-201ENST00000410684 333 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 MTATP6P18-201ENST00000417994 673 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX6-1P78426 MTCO2P19-201ENST00000427513 598 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AL512326.1-201ENST00000443050 721 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 RPS4XP4-201ENST00000443195 763 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX6-1P78426 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AC091153.1-201ENST00000466297 402 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 NIP7P2-201ENST00000485801 544 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 MTAPP1-201ENST00000489154 819 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 NIFKP7-201ENST00000503365 834 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX6-1P78426 RNU6-410P-201ENST00000517006 107 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AC128657.1-201ENST00000549459 145 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AL157687.1-201ENST00000554853 619 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AC092325.1-201ENST00000566449 554 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AC068135.2-201ENST00000569293 1028 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NKX6-1P78426 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 XIAPP1-201ENST00000603162 600 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AL391646.1-201ENST00000603860 190 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AL034351.1-201ENST00000605288 668 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AL136363.1-201ENST00000605349 337 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AC007014.2-201ENST00000615581 479 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX6-1P78426 AL356321.1-201ENST00000621360 228 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 AC244100.1-202ENST00000621554 382 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 FRG1KP-201ENST00000623592 341 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 MIR4275-201ENST00000636486 87 ntBASIC4.26□□□□□ -1.73
NKX6-1P78426 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.26□□□□□ -1.73
NKX6-1P78426 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.26□□□□□ -1.73
NKX6-1P78426 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX6-1P78426 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.26□□□□□ -1.73
NKX6-1P78426 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms