Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCNA1P78396 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCNA1P78396 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCNA1P78396 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.41□□□□□ -1.86
CCNA1P78396 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCNA1P78396 AC073325.2-201ENST00000339545 159 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 SNORA9.2-201ENST00000365361 133 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNA1P78396 AP002088.1-201ENST00000382740 395 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 MTND4LP20-201ENST00000402379 270 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 RN7SKP284-201ENST00000411002 343 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.4□□□□□ -1.87
CCNA1P78396 AC099677.1-201ENST00000420575 175 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 AL139413.1-201ENST00000421309 217 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 NUP35P1-201ENST00000422734 947 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNA1P78396 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNA1P78396 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.4□□□□□ -1.87
CCNA1P78396 RABEPKP1-201ENST00000440529 1026 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 CYCSP20-201ENST00000473154 315 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNA1P78396 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCNA1P78396 AC026412.2-201ENST00000512270 1075 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 SNORA31.1-201ENST00000515993 133 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 RN7SKP132-201ENST00000516001 208 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 SNORA31.5-201ENST00000516190 133 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNA1P78396 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNA1P78396 AC018630.1-201ENST00000541376 925 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNA1P78396 AC087481.2-201ENST00000565492 330 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.4□□□□□ -1.87
CCNA1P78396 AC100814.1-201ENST00000606963 623 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 AP004247.3-201ENST00000608682 624 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCNA1P78396 AC090740.1-201ENST00000623193 2262 ntBASIC3.4□□□□□ -1.87
CCNA1P78396 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCNA1P78396 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.39□□□□□ -1.87
CCNA1P78396 RNU6-989P-201ENST00000362756 107 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 RNU6-921P-201ENST00000384361 107 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 RPS15AP6-201ENST00000420703 385 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 FNDC3CP-201ENST00000420795 1155 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 RPL31P12-201ENST00000422587 358 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 RPP40P1-201ENST00000426762 456 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AC063976.3-201ENST00000426849 329 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 MTATP6P4-201ENST00000427725 675 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNA1P78396 AC087499.2-201ENST00000432861 149 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.39□□□□□ -1.87
CCNA1P78396 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.39□□□□□ -1.87
CCNA1P78396 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNA1P78396 HMGB1P1-201ENST00000522557 636 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 OR5G4P-201ENST00000525251 760 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AP001636.2-201ENST00000525517 696 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCNA1P78396 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNA1P78396 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNA1P78396 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNA1P78396 COX6CP3-201ENST00000580869 223 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AC092474.3-201ENST00000603022 568 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AC079791.1-201ENST00000605356 973 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AC104307.1-201ENST00000616142 196 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AL163051.2-201ENST00000618976 735 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNA1P78396 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 AP003122.6-201ENST00000623831 495 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.39□□□□□ -1.87
CCNA1P78396 AC090897.3-201ENST00000636973 1157 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCNA1P78396 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCNA1P78396 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CCNA1P78396 AC092435.3-201ENST00000565538 3654 ntBASIC3.39□□□□□ -1.87
CCNA1P78396 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.38□□□□□ -1.87
CCNA1P78396 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCNA1P78396 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.38□□□□□ -1.87
CCNA1P78396 RNU1-75P-201ENST00000347264 129 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AC062016.1-201ENST00000355719 319 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AL445529.1-201ENST00000398713 389 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.38□□□□□ -1.87
CCNA1P78396 AC019097.1-201ENST00000424783 735 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.38□□□□□ -1.87
CCNA1P78396 BX679664.1-201ENST00000434429 253 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 ISCA1P2-201ENST00000438679 421 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AC002542.1-201ENST00000440683 193 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 HMGB1P25-201ENST00000468402 607 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 ST13P14-201ENST00000474095 734 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.38□□□□□ -1.87
CCNA1P78396 MLLT10P2-201ENST00000506434 249 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 SNORA31.8-201ENST00000516327 108 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 IGJP1-201ENST00000522682 475 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AP001804.3-201ENST00000525146 880 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.38□□□□□ -1.87
CCNA1P78396 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCNA1P78396 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
CCNA1P78396 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.38□□□□□ -1.87
CCNA1P78396 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms