Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RPL27AP5-201ENST00000469428 449 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 RBM43P1-201ENST00000476891 1081 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.38□□□□□ -2.03
AP3S2P59780 NOP56P3-201ENST00000549457 385 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.38□□□□□ -2.03
AP3S2P59780 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.38□□□□□ -2.03
AP3S2P59780 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.38□□□□□ -2.03
AP3S2P59780 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.38□□□□□ -2.03
AP3S2P59780 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.38□□□□□ -2.03
AP3S2P59780 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.38□□□□□ -2.03
AP3S2P59780 AC125494.3-201ENST00000602759 455 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 AL160237.3-201ENST00000604114 1013 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 AC067959.1-201ENST00000604334 379 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.38□□□□□ -2.03
AP3S2P59780 AC068722.2-201ENST00000618734 544 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.38□□□□□ -2.03
AP3S2P59780 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
AP3S2P59780 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
AP3S2P59780 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
AP3S2P59780 AC010680.1-201ENST00000590024 3590 ntBASIC2.38□□□□□ -2.03
AP3S2P59780 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.37□□□□□ -2.03
AP3S2P59780 RNU6-851P-201ENST00000384565 107 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.37□□□□□ -2.03
AP3S2P59780 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.37□□□□□ -2.03
AP3S2P59780 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.37□□□□□ -2.03
AP3S2P59780 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.37□□□□□ -2.03
AP3S2P59780 AC016712.1-201ENST00000431088 378 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 AC006028.1-201ENST00000438379 402 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 AC127537.2-201ENST00000439258 465 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 RPS15AP7-201ENST00000439294 405 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.37□□□□□ -2.03
AP3S2P59780 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.37□□□□□ -2.03
AP3S2P59780 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.37□□□□□ -2.03
AP3S2P59780 HMGB1P41-201ENST00000520234 440 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 AC087808.1-201ENST00000520501 361 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.37□□□□□ -2.03
AP3S2P59780 AP003102.1-201ENST00000525638 661 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.37□□□□□ -2.03
AP3S2P59780 AC007224.1-201ENST00000564410 144 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 AC010546.1-201ENST00000569391 485 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 OR1M4P-201ENST00000589199 287 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 NRBF2P5-201ENST00000603087 788 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.37□□□□□ -2.03
AP3S2P59780 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 AL353748.2-201ENST00000622148 471 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
AP3S2P59780 ZNF271P-202ENST00000465539 1970 ntBASIC2.37□□□□□ -2.03
AP3S2P59780 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
AP3S2P59780 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
AP3S2P59780 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
AP3S2P59780 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
AP3S2P59780 RNU1-33P-201ENST00000364249 162 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RNU1-100P-201ENST00000365255 165 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RNU6-198P-201ENST00000384258 104 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RNA5SP354-201ENST00000391247 136 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RNA5SP181-201ENST00000410246 98 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RPS29P4-201ENST00000414733 161 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.36□□□□□ -2.03
AP3S2P59780 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AC129850.1-201ENST00000436203 508 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.36□□□□□ -2.03
AP3S2P59780 RPS12P2-201ENST00000439728 269 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RAB11AP1-201ENST00000442978 646 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
AP3S2P59780 AC104073.1-201ENST00000451988 151 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.36□□□□□ -2.03
AP3S2P59780 AC073901.1-201ENST00000462471 408 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AC126182.1-201ENST00000478134 357 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RPS3AP43-201ENST00000479743 781 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RN7SL293P-201ENST00000481765 281 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 RPS27P26-201ENST00000494583 239 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.36□□□□□ -2.03
AP3S2P59780 HPRT1P1-201ENST00000509498 657 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AC113155.1-201ENST00000511141 769 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.36□□□□□ -2.03
AP3S2P59780 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.36□□□□□ -2.03
AP3S2P59780 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
AP3S2P59780 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.36□□□□□ -2.03
AP3S2P59780 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.36□□□□□ -2.03
AP3S2P59780 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.36□□□□□ -2.03
AP3S2P59780 AC022069.1-201ENST00000582910 658 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AC025588.4-201ENST00000615802 908 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AC024595.1-201ENST00000623088 387 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AC027309.3-201ENST00000623419 351 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 AL034408.1-202ENST00000636088 415 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
AP3S2P59780 AC096644.4-201ENST00000563417 2912 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 Z82209.1-201ENST00000422141 2135 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.36□□□□□ -2.03
AP3S2P59780 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.36□□□□□ -2.03
AP3S2P59780 AC111188.2-201ENST00000529697 1387 ntBASIC2.36□□□□□ -2.03
AP3S2P59780 PABPC1P9-201ENST00000426076 1612 ntBASIC2.35□□□□□ -2.03
AP3S2P59780 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
AP3S2P59780 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
AP3S2P59780 RPL32P3-201ENST00000359025 275 ntBASIC2.35□□□□□ -2.03
AP3S2P59780 RNU1-105P-201ENST00000363470 161 ntBASIC2.35□□□□□ -2.03
AP3S2P59780 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms