Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC008173.1-201ENST00000418901 264 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 AL035410.1-201ENST00000427409 427 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 AL035407.1-201ENST00000429211 571 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN6P56747 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN6P56747 B3GNT2P1-201ENST00000434960 952 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 MTCO3P43-201ENST00000440974 771 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 RPS24P13-201ENST00000442520 397 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.89□□□□□ -1.95
CLDN6P56747 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.89□□□□□ -1.95
CLDN6P56747 KCTD9P5-201ENST00000504141 1170 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN6P56747 IGHV3-76-201ENST00000522465 295 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN6P56747 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN6P56747 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN6P56747 AC091544.4-201ENST00000555268 342 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN6P56747 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.89□□□□□ -1.95
CLDN6P56747 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN6P56747 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.89□□□□□ -1.95
CLDN6P56747 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN6P56747 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN6P56747 AL365400.2-201ENST00000605604 902 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 AC007619.2-201ENST00000605743 379 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN6P56747 AC073968.1-201ENST00000618594 637 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 AC098679.5-201ENST00000624394 571 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 SNORA50A-202ENST00000629536 136 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 MTND2P41-201ENST00000637599 773 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 AC008432.1-201ENST00000615912 1320 ntBASIC2.89□□□□□ -1.95
CLDN6P56747 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN6P56747 MTND4P21-201ENST00000453886 1357 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN6P56747 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN6P56747 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CLDN6P56747 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN6P56747 AC009237.2-201ENST00000421358 284 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 DUTP6-201ENST00000425573 462 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN6P56747 AC004022.1-201ENST00000447766 1066 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 Z99127.3-201ENST00000448158 395 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN6P56747 RPS23P3-201ENST00000470993 430 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.88□□□□□ -1.95
CLDN6P56747 HMGN2P13-201ENST00000476476 274 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 RPL21P47-201ENST00000483696 477 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN6P56747 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.88□□□□□ -1.95
CLDN6P56747 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN6P56747 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN6P56747 AC111000.2-201ENST00000507775 550 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 SCARNA20.6-201ENST00000517251 106 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 AC124293.1-201ENST00000530034 493 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CLDN6P56747 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN6P56747 AL845331.3-202ENST00000562856 261 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 BPTFP1-201ENST00000579209 492 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.88□□□□□ -1.95
CLDN6P56747 AL020997.3-201ENST00000602843 359 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 AC016877.3-201ENST00000606778 504 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 AL110115.1-201ENST00000614396 364 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 AL118508.4-201ENST00000624142 1176 ntBASIC2.88□□□□□ -1.95
CLDN6P56747 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.88□□□□□ -1.95
CLDN6P56747 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN6P56747 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.87□□□□□ -1.95
CLDN6P56747 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLDN6P56747 AC010733.2-201ENST00000589496 5702 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CLDN6P56747 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.87□□□□□ -1.95
CLDN6P56747 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CLDN6P56747 AC073325.2-201ENST00000339545 159 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 RNU6-650P-201ENST00000365658 111 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 XGY1-201ENST00000381172 446 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 RNU6-821P-201ENST00000390995 107 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AL354719.1-201ENST00000406535 843 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AL445183.3-201ENST00000414168 502 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 HMGB3P23-201ENST00000414981 585 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AC006960.1-201ENST00000419980 153 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.87□□□□□ -1.95
CLDN6P56747 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.87□□□□□ -1.95
CLDN6P56747 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.87□□□□□ -1.95
CLDN6P56747 HMGB1P25-201ENST00000468402 607 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 TRBV12-1-201ENST00000479785 344 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 MTND4LP22-201ENST00000508209 276 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AC114781.4-201ENST00000513707 639 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.87□□□□□ -1.95
CLDN6P56747 RNU1-143P-201ENST00000516296 146 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.87□□□□□ -1.95
CLDN6P56747 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.87□□□□□ -1.95
CLDN6P56747 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.87□□□□□ -1.95
CLDN6P56747 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.87□□□□□ -1.95
CLDN6P56747 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.87□□□□□ -1.95
CLDN6P56747 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.87□□□□□ -1.95
CLDN6P56747 AC138761.3-201ENST00000579993 334 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 AP001029.3-201ENST00000588063 596 ntBASIC2.87□□□□□ -1.95
CLDN6P56747 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms