Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MTCYBP43-201ENST00000513621 740 ntBASIC3.62□□□□□ -1.83
CDH13P55290 RNA5SP164-201ENST00000516533 110 ntBASIC3.62□□□□□ -1.83
CDH13P55290 RNU6-678P-201ENST00000516832 109 ntBASIC3.62□□□□□ -1.83
CDH13P55290 RNU6-1073P-201ENST00000517182 106 ntBASIC3.62□□□□□ -1.83
CDH13P55290 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.62□□□□□ -1.83
CDH13P55290 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 CR383656.7-201ENST00000548164 174 ntBASIC3.62□□□□□ -1.83
CDH13P55290 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH13P55290 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH13P55290 KLKP1-201ENST00000595979 403 ntBASIC3.62□□□□□ -1.83
CDH13P55290 DUXAP11-201ENST00000603858 526 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AL031176.1-201ENST00000604554 466 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AL163642.2-201ENST00000604722 1019 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AC018714.1-201ENST00000605028 208 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AC072039.2-201ENST00000608883 439 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AC006023.2-201ENST00000609916 167 ntBASIC3.62□□□□□ -1.83
CDH13P55290 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 AP003485.2-201ENST00000623636 610 ntBASIC3.62□□□□□ -1.83
CDH13P55290 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.62□□□□□ -1.83
CDH13P55290 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.62□□□□□ -1.83
CDH13P55290 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDH13P55290 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.62□□□□□ -1.83
CDH13P55290 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDH13P55290 AC092447.10-201ENST00000620607 1652 ntBASIC3.62□□□□□ -1.83
CDH13P55290 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 AL133383.2-201ENST00000622958 2336 ntBASIC3.61□□□□□ -1.83
CDH13P55290 TNPO1P3-201ENST00000436471 2662 ntBASIC3.61□□□□□ -1.83
CDH13P55290 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH13P55290 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH13P55290 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CDH13P55290 Y_RNA.234-201ENST00000364409 97 ntBASIC3.61□□□□□ -1.83
CDH13P55290 RNA5SP283-201ENST00000365604 119 ntBASIC3.61□□□□□ -1.83
CDH13P55290 SNORD3H-201ENST00000384486 214 ntBASIC3.61□□□□□ -1.83
CDH13P55290 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDH13P55290 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH13P55290 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
CDH13P55290 RNU2-37P-201ENST00000410695 177 ntBASIC3.61□□□□□ -1.83
CDH13P55290 RAB28P1-201ENST00000411517 641 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH13P55290 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 AL159169.1-201ENST00000421119 127 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CDH13P55290 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH13P55290 AL591503.2-201ENST00000442314 1005 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH13P55290 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH13P55290 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 RN7SL385P-201ENST00000468873 276 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AC007537.2-201ENST00000472093 511 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AC068587.2-201ENST00000478386 781 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AC093278.1-201ENST00000494700 600 ntBASIC3.61□□□□□ -1.83
CDH13P55290 RPL7P47-201ENST00000497299 556 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AC096751.1-202ENST00000502691 1067 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH13P55290 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH13P55290 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH13P55290 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.61□□□□□ -1.83
CDH13P55290 MIR3690-201ENST00000580266 75 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AL360219.1-201ENST00000610230 366 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 AC083809.1-201ENST00000615051 472 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AC091304.6-201ENST00000619761 202 ntBASIC3.61□□□□□ -1.83
CDH13P55290 AL031667.3-201ENST00000620124 655 ntBASIC3.61□□□□□ -1.83
CDH13P55290 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH13P55290 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH13P55290 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH13P55290 CEP170P1-201ENST00000502249 4587 ntBASIC3.61□□□□□ -1.83
CDH13P55290 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH13P55290 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH13P55290 RNU6-433P-201ENST00000363216 104 ntBASIC3.6□□□□□ -1.83
CDH13P55290 Y_RNA.302-201ENST00000364997 102 ntBASIC3.6□□□□□ -1.83
CDH13P55290 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH13P55290 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH13P55290 HSPE1P26-201ENST00000405341 275 ntBASIC3.6□□□□□ -1.83
CDH13P55290 MIR320C1-201ENST00000408566 88 ntBASIC3.6□□□□□ -1.83
CDH13P55290 RNU2-47P-201ENST00000410649 186 ntBASIC3.6□□□□□ -1.83
CDH13P55290 RPS15AP38-201ENST00000413110 372 ntBASIC3.6□□□□□ -1.83
CDH13P55290 RPL23AP39-201ENST00000415533 405 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH13P55290 PTP4A1P5-201ENST00000420305 455 ntBASIC3.6□□□□□ -1.83
CDH13P55290 BEND7P1-201ENST00000422058 457 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AC002075.2-201ENST00000425207 252 ntBASIC3.6□□□□□ -1.83
CDH13P55290 AL593851.1-201ENST00000426171 157 ntBASIC3.6□□□□□ -1.83
CDH13P55290 RPL21P66-201ENST00000426566 466 ntBASIC3.6□□□□□ -1.83
CDH13P55290 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms