Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.56□□□□□ -1.84
VCPP55072 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.56□□□□□ -1.84
VCPP55072 ARPC3P2-201ENST00000457786 533 ntBASIC3.56□□□□□ -1.84
VCPP55072 snoU13.3-201ENST00000459441 104 ntBASIC3.56□□□□□ -1.84
VCPP55072 RPL23AP67-201ENST00000465341 474 ntBASIC3.56□□□□□ -1.84
VCPP55072 AC010285.1-201ENST00000470580 392 ntBASIC3.56□□□□□ -1.84
VCPP55072 MTCO3P35-201ENST00000485582 781 ntBASIC3.56□□□□□ -1.84
VCPP55072 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.56□□□□□ -1.84
VCPP55072 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.56□□□□□ -1.84
VCPP55072 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.56□□□□□ -1.84
VCPP55072 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VCPP55072 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.56□□□□□ -1.84
VCPP55072 AC092470.1-201ENST00000546187 132 ntBASIC3.56□□□□□ -1.84
VCPP55072 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.56□□□□□ -1.84
VCPP55072 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.56□□□□□ -1.84
VCPP55072 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.56□□□□□ -1.84
VCPP55072 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
VCPP55072 CKS1BP3-201ENST00000600888 237 ntBASIC3.56□□□□□ -1.84
VCPP55072 BNIP3P39-201ENST00000601077 554 ntBASIC3.56□□□□□ -1.84
VCPP55072 AC113368.1-201ENST00000603736 382 ntBASIC3.56□□□□□ -1.84
VCPP55072 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.56□□□□□ -1.84
VCPP55072 AL365400.2-201ENST00000605604 902 ntBASIC3.56□□□□□ -1.84
VCPP55072 HSPE1P14-201ENST00000605812 302 ntBASIC3.56□□□□□ -1.84
VCPP55072 ATP5A1P2-202ENST00000616464 443 ntBASIC3.56□□□□□ -1.84
VCPP55072 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.56□□□□□ -1.84
VCPP55072 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.56□□□□□ -1.84
VCPP55072 AC068620.4-201ENST00000636730 1182 ntBASIC3.56□□□□□ -1.84
VCPP55072 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VCPP55072 AL136164.4-201ENST00000625013 2135 ntBASIC3.56□□□□□ -1.84
VCPP55072 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VCPP55072 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.55□□□□□ -1.84
VCPP55072 ZNF734P-201ENST00000419494 1534 ntBASIC3.55□□□□□ -1.84
VCPP55072 RNU6-1226P-201ENST00000384317 107 ntBASIC3.55□□□□□ -1.84
VCPP55072 RNU6-837P-201ENST00000391056 108 ntBASIC3.55□□□□□ -1.84
VCPP55072 RSL24D1P1-201ENST00000404972 493 ntBASIC3.55□□□□□ -1.84
VCPP55072 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VCPP55072 AL139413.1-201ENST00000421309 217 ntBASIC3.55□□□□□ -1.84
VCPP55072 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.55□□□□□ -1.84
VCPP55072 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.55□□□□□ -1.84
VCPP55072 NPM1P13-201ENST00000452663 865 ntBASIC3.55□□□□□ -1.84
VCPP55072 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.55□□□□□ -1.84
VCPP55072 RPL23AP44-201ENST00000482216 473 ntBASIC3.55□□□□□ -1.84
VCPP55072 AL024509.2-201ENST00000493462 493 ntBASIC3.55□□□□□ -1.84
VCPP55072 OR2A20P-203ENST00000498397 1268 ntBASIC3.55□□□□□ -1.84
VCPP55072 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.55□□□□□ -1.84
VCPP55072 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.55□□□□□ -1.84
VCPP55072 SNORA19.3-201ENST00000516165 130 ntBASIC3.55□□□□□ -1.84
VCPP55072 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.55□□□□□ -1.84
VCPP55072 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.55□□□□□ -1.84
VCPP55072 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.55□□□□□ -1.84
VCPP55072 MIR4666A-201ENST00000580160 79 ntBASIC3.55□□□□□ -1.84
VCPP55072 AC073387.2-201ENST00000604797 784 ntBASIC3.55□□□□□ -1.84
VCPP55072 AP000238.1-201ENST00000608759 426 ntBASIC3.55□□□□□ -1.84
VCPP55072 AC105227.2-201ENST00000615075 605 ntBASIC3.55□□□□□ -1.84
VCPP55072 AC084824.4-201ENST00000620106 731 ntBASIC3.55□□□□□ -1.84
VCPP55072 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
VCPP55072 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.55□□□□□ -1.84
VCPP55072 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.55□□□□□ -1.84
VCPP55072 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VCPP55072 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.55□□□□□ -1.84
VCPP55072 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.55□□□□□ -1.84
VCPP55072 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
VCPP55072 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.54□□□□□ -1.84
VCPP55072 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
VCPP55072 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.54□□□□□ -1.84
VCPP55072 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VCPP55072 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VCPP55072 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 Z99755.1-201ENST00000414048 380 ntBASIC3.54□□□□□ -1.84
VCPP55072 RPS3AP9-201ENST00000417027 792 ntBASIC3.54□□□□□ -1.84
VCPP55072 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 OFD1P18Y-201ENST00000420889 959 ntBASIC3.54□□□□□ -1.84
VCPP55072 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 AC114973.1-201ENST00000429057 632 ntBASIC3.54□□□□□ -1.84
VCPP55072 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.54□□□□□ -1.84
VCPP55072 AC008264.1-201ENST00000447612 367 ntBASIC3.54□□□□□ -1.84
VCPP55072 SSXP4-201ENST00000451349 245 ntBASIC3.54□□□□□ -1.84
VCPP55072 RPS24P6-201ENST00000452670 400 ntBASIC3.54□□□□□ -1.84
VCPP55072 HMGB1P15-201ENST00000453854 435 ntBASIC3.54□□□□□ -1.84
VCPP55072 RPS4XP22-201ENST00000480755 780 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC011352.3-201ENST00000505162 593 ntBASIC3.54□□□□□ -1.84
VCPP55072 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VCPP55072 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 AC109471.1-201ENST00000511631 612 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC010265.1-201ENST00000513509 211 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC104057.1-201ENST00000515547 497 ntBASIC3.54□□□□□ -1.84
VCPP55072 RNU6-276P-201ENST00000516114 96 ntBASIC3.54□□□□□ -1.84
VCPP55072 SNORA31.20-201ENST00000517111 133 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.54□□□□□ -1.84
VCPP55072 AC023632.1-201ENST00000518463 375 ntBASIC3.54□□□□□ -1.84
VCPP55072 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 AC004024.1-201ENST00000549244 247 ntBASIC3.54□□□□□ -1.84
VCPP55072 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.54□□□□□ -1.84
VCPP55072 AC044913.1-201ENST00000557200 430 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.54□□□□□ -1.84
VCPP55072 AC122134.1-202ENST00000569111 1201 ntBASIC3.54□□□□□ -1.84
VCPP55072 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms