Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNA5SP120-201ENST00000410900 112 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 HMGB1P49-201ENST00000418882 569 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 GLRXP1-201ENST00000423261 334 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 CYCSP4-201ENST00000429682 331 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMK1P53667 MTND4P6-201ENST00000438297 472 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.77□□□□□ -1.81
LIMK1P53667 MTND2P20-201ENST00000440805 661 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.77□□□□□ -1.81
LIMK1P53667 AC087312.1-201ENST00000471411 480 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 UBE2DNL-203ENST00000474922 222 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 ACTG1P13-201ENST00000486987 1043 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 XKRY-201ENST00000510392 1100 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 RN7SKP265-201ENST00000516448 223 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 RN7SKP83-201ENST00000516512 178 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC087369.1-201ENST00000520775 996 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK1P53667 AL121603.1-201ENST00000553815 142 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK1P53667 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK1P53667 AP005205.1-201ENST00000563503 508 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC009712.1-201ENST00000564938 316 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK1P53667 AC128687.1-201ENST00000605304 619 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC006270.3-201ENST00000605967 1036 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC080013.3-201ENST00000606839 578 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.77□□□□□ -1.81
LIMK1P53667 AC135507.2-201ENST00000612443 309 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 MIR8057-201ENST00000620957 69 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC040168.1-201ENST00000623594 991 ntBASIC3.77□□□□□ -1.81
LIMK1P53667 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LIMK1P53667 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LIMK1P53667 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
LIMK1P53667 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LIMK1P53667 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK1P53667 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK1P53667 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK1P53667 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK1P53667 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK1P53667 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
LIMK1P53667 RNU6-989P-201ENST00000362756 107 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 RNU6-878P-201ENST00000384578 110 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LIMK1P53667 RNU6-821P-201ENST00000390995 107 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 Z98941.1-201ENST00000407764 100 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 MIR1289-1-201ENST00000408836 144 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 RNU2-15P-201ENST00000410692 191 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 AC006960.1-201ENST00000419980 153 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.76□□□□□ -1.81
LIMK1P53667 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.76□□□□□ -1.81
LIMK1P53667 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.76□□□□□ -1.81
LIMK1P53667 MTND3P1-201ENST00000441336 220 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 AL591719.1-201ENST00000444669 744 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.76□□□□□ -1.81
LIMK1P53667 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 RNY4P37-201ENST00000516225 96 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 MIR4637-201ENST00000582405 84 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 AC234772.3-201ENST00000602277 528 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 AC069304.2-201ENST00000605154 435 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.76□□□□□ -1.81
LIMK1P53667 AC244205.2-202ENST00000635781 342 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK1P53667 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
LIMK1P53667 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
LIMK1P53667 AP002907.1-201ENST00000606361 1430 ntBASIC3.76□□□□□ -1.81
LIMK1P53667 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIMK1P53667 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LIMK1P53667 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LIMK1P53667 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIMK1P53667 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIMK1P53667 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.75□□□□□ -1.81
LIMK1P53667 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIMK1P53667 MIR423-201ENST00000362201 94 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 RNA5SP258-201ENST00000362750 119 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 SNORA38.1-201ENST00000364172 131 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 RNU1-33P-201ENST00000364249 162 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
LIMK1P53667 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMK1P53667 Y_RNA.510-201ENST00000384511 114 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMK1P53667 ELOCP9-201ENST00000418624 239 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AIMP1P1-201ENST00000418670 937 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.75□□□□□ -1.81
LIMK1P53667 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.75□□□□□ -1.81
LIMK1P53667 Z73417.1-201ENST00000447373 778 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 MTCO3P11-201ENST00000455103 774 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 RPL18AP17-201ENST00000455326 198 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 RPS15AP17-201ENST00000470598 390 ntBASIC3.75□□□□□ -1.81
LIMK1P53667 RPL7P18-201ENST00000478965 734 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms