Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
COPAP53621 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
COPAP53621 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
COPAP53621 SNORA31-201ENST00000362607 130 ntBASIC4.39□□□□□ -1.71
COPAP53621 RNU6-853P-201ENST00000364306 107 ntBASIC4.39□□□□□ -1.71
COPAP53621 U3.29-201ENST00000391296 212 ntBASIC4.39□□□□□ -1.71
COPAP53621 AC097374.1-203ENST00000400783 485 ntBASIC4.39□□□□□ -1.71
COPAP53621 AL356421.1-201ENST00000403255 413 ntBASIC4.39□□□□□ -1.71
COPAP53621 MIR1183-201ENST00000408856 89 ntBASIC4.39□□□□□ -1.71
COPAP53621 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.39□□□□□ -1.71
COPAP53621 RPS20P14-201ENST00000412545 360 ntBASIC4.39□□□□□ -1.71
COPAP53621 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.39□□□□□ -1.71
COPAP53621 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.39□□□□□ -1.71
COPAP53621 AC109583.1-201ENST00000432156 268 ntBASIC4.39□□□□□ -1.71
COPAP53621 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.39□□□□□ -1.71
COPAP53621 SKP1P1-201ENST00000438081 489 ntBASIC4.39□□□□□ -1.71
COPAP53621 RPL7P36-201ENST00000444633 681 ntBASIC4.39□□□□□ -1.71
COPAP53621 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.39□□□□□ -1.71
COPAP53621 snoU13.8-201ENST00000458890 104 ntBASIC4.39□□□□□ -1.71
COPAP53621 AC034222.1-201ENST00000494052 532 ntBASIC4.39□□□□□ -1.71
COPAP53621 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.39□□□□□ -1.71
COPAP53621 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.39□□□□□ -1.71
COPAP53621 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.39□□□□□ -1.71
COPAP53621 RNU6-27P-201ENST00000516146 107 ntBASIC4.39□□□□□ -1.71
COPAP53621 RNU6-720P-201ENST00000516363 108 ntBASIC4.39□□□□□ -1.71
COPAP53621 RNA5SP49-201ENST00000516450 115 ntBASIC4.39□□□□□ -1.71
COPAP53621 RNU6-405P-201ENST00000516637 110 ntBASIC4.39□□□□□ -1.71
COPAP53621 OR5M7P-201ENST00000526140 972 ntBASIC4.39□□□□□ -1.71
COPAP53621 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.39□□□□□ -1.71
COPAP53621 ZNF519P3-201ENST00000557158 1032 ntBASIC4.39□□□□□ -1.71
COPAP53621 AC090616.5-202ENST00000582111 297 ntBASIC4.39□□□□□ -1.71
COPAP53621 AC010928.3-201ENST00000587712 541 ntBASIC4.39□□□□□ -1.71
COPAP53621 TPMTP1-201ENST00000592307 737 ntBASIC4.39□□□□□ -1.71
COPAP53621 SEPT7P9-203ENST00000604116 343 ntBASIC4.39□□□□□ -1.71
COPAP53621 BCRP9-201ENST00000605312 388 ntBASIC4.39□□□□□ -1.71
COPAP53621 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.39□□□□□ -1.71
COPAP53621 AC138932.5-201ENST00000617759 563 ntBASIC4.39□□□□□ -1.71
COPAP53621 RMST_9.1-201ENST00000619945 193 ntBASIC4.39□□□□□ -1.71
COPAP53621 MIR8059-201ENST00000620427 81 ntBASIC4.39□□□□□ -1.71
COPAP53621 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COPAP53621 EXOC5P1-201ENST00000510543 1969 ntBASIC4.39□□□□□ -1.71
COPAP53621 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COPAP53621 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
COPAP53621 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COPAP53621 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.39□□□□□ -1.71
COPAP53621 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COPAP53621 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.39□□□□□ -1.71
COPAP53621 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
COPAP53621 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.39□□□□□ -1.71
COPAP53621 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
COPAP53621 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
COPAP53621 TEX21P-201ENST00000447107 1476 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC066616.2-201ENST00000559334 1481 ntBASIC4.38□□□□□ -1.71
COPAP53621 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.38□□□□□ -1.71
COPAP53621 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
COPAP53621 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COPAP53621 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COPAP53621 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COPAP53621 RNU6-263P-201ENST00000363811 107 ntBASIC4.38□□□□□ -1.71
COPAP53621 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COPAP53621 SNORA74C-2-201ENST00000411179 201 ntBASIC4.38□□□□□ -1.71
COPAP53621 AF274854.1-201ENST00000413236 615 ntBASIC4.38□□□□□ -1.71
COPAP53621 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.38□□□□□ -1.71
COPAP53621 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.38□□□□□ -1.71
COPAP53621 RPL36AP36-201ENST00000418616 301 ntBASIC4.38□□□□□ -1.71
COPAP53621 MTCYBP24-201ENST00000420387 1106 ntBASIC4.38□□□□□ -1.71
COPAP53621 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.38□□□□□ -1.71
COPAP53621 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.38□□□□□ -1.71
COPAP53621 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.38□□□□□ -1.71
COPAP53621 NANOGP6-201ENST00000429190 847 ntBASIC4.38□□□□□ -1.71
COPAP53621 USP9YP14-201ENST00000430663 563 ntBASIC4.38□□□□□ -1.71
COPAP53621 BTF3P10-201ENST00000433415 495 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC122718.1-201ENST00000439448 744 ntBASIC4.38□□□□□ -1.71
COPAP53621 USP9YP12-201ENST00000450481 570 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.38□□□□□ -1.71
COPAP53621 MTCO1P42-201ENST00000457379 726 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC079804.1-201ENST00000461922 436 ntBASIC4.38□□□□□ -1.71
COPAP53621 FAM133DP-201ENST00000464802 691 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC092451.1-201ENST00000480211 153 ntBASIC4.38□□□□□ -1.71
COPAP53621 RN7SL812P-201ENST00000493791 279 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC093677.1-201ENST00000514414 678 ntBASIC4.38□□□□□ -1.71
COPAP53621 AP003392.2-201ENST00000527269 208 ntBASIC4.38□□□□□ -1.71
COPAP53621 AP002748.2-201ENST00000528671 348 ntBASIC4.38□□□□□ -1.71
COPAP53621 OR4P1P-201ENST00000530808 1136 ntBASIC4.38□□□□□ -1.71
COPAP53621 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.38□□□□□ -1.71
COPAP53621 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.38□□□□□ -1.71
COPAP53621 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.38□□□□□ -1.71
COPAP53621 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.38□□□□□ -1.71
COPAP53621 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.38□□□□□ -1.71
COPAP53621 AC107954.1-201ENST00000565906 727 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC106785.1-201ENST00000565935 262 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC007599.1-201ENST00000568688 1174 ntBASIC4.38□□□□□ -1.71
COPAP53621 MTND1P15-201ENST00000579262 949 ntBASIC4.38□□□□□ -1.71
COPAP53621 RN7SL600P-201ENST00000581811 299 ntBASIC4.38□□□□□ -1.71
COPAP53621 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.38□□□□□ -1.71
COPAP53621 AC073648.5-201ENST00000603502 305 ntBASIC4.38□□□□□ -1.71
COPAP53621 AL161729.3-201ENST00000603533 673 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC004492.1-201ENST00000607036 742 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC091965.4-201ENST00000607691 587 ntBASIC4.38□□□□□ -1.71
COPAP53621 AC012531.5-201ENST00000611375 151 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms