Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OR4H6P-202ENST00000603819 340 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AC011374.2-201ENST00000607135 526 ntBASIC3.55□□□□□ -1.84
MSH6P52701 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AL020991.1-201ENST00000612314 373 ntBASIC3.55□□□□□ -1.84
MSH6P52701 VN1R9P-201ENST00000614184 867 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AC092326.2-201ENST00000624772 1561 ntBASIC3.55□□□□□ -1.84
MSH6P52701 AC080128.1-201ENST00000474389 1917 ntBASIC3.54□□□□□ -1.84
MSH6P52701 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MSH6P52701 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MSH6P52701 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MSH6P52701 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MSH6P52701 AC104454.1-201ENST00000421341 1401 ntBASIC3.54□□□□□ -1.84
MSH6P52701 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
MSH6P52701 METTL21EP-201ENST00000298105 713 ntBASIC3.54□□□□□ -1.84
MSH6P52701 RNU6-252P-201ENST00000363232 107 ntBASIC3.54□□□□□ -1.84
MSH6P52701 RNU6-98P-201ENST00000384173 107 ntBASIC3.54□□□□□ -1.84
MSH6P52701 MIR142-201ENST00000384835 87 ntBASIC3.54□□□□□ -1.84
MSH6P52701 HMGB1P13-201ENST00000406019 642 ntBASIC3.54□□□□□ -1.84
MSH6P52701 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
MSH6P52701 LINC01347-201ENST00000417964 355 ntBASIC3.54□□□□□ -1.84
MSH6P52701 YPEL5P1-201ENST00000419731 367 ntBASIC3.54□□□□□ -1.84
MSH6P52701 RPL30P3-201ENST00000424262 333 ntBASIC3.54□□□□□ -1.84
MSH6P52701 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.54□□□□□ -1.84
MSH6P52701 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.54□□□□□ -1.84
MSH6P52701 AL513321.1-201ENST00000441175 761 ntBASIC3.54□□□□□ -1.84
MSH6P52701 CEACAMP4-201ENST00000457676 421 ntBASIC3.54□□□□□ -1.84
MSH6P52701 RPL23AP62-201ENST00000463396 453 ntBASIC3.54□□□□□ -1.84
MSH6P52701 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.54□□□□□ -1.84
MSH6P52701 CIR1P1-201ENST00000524055 1133 ntBASIC3.54□□□□□ -1.84
MSH6P52701 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.54□□□□□ -1.84
MSH6P52701 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.54□□□□□ -1.84
MSH6P52701 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.54□□□□□ -1.84
MSH6P52701 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.54□□□□□ -1.84
MSH6P52701 AL450270.1-201ENST00000606160 391 ntBASIC3.54□□□□□ -1.84
MSH6P52701 MIR1264-201ENST00000616374 69 ntBASIC3.54□□□□□ -1.84
MSH6P52701 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.54□□□□□ -1.84
MSH6P52701 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.54□□□□□ -1.84
MSH6P52701 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
MSH6P52701 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MSH6P52701 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MSH6P52701 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
MSH6P52701 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MSH6P52701 HMGB1P10-201ENST00000395823 563 ntBASIC3.53□□□□□ -1.84
MSH6P52701 BTF3P7-201ENST00000407097 488 ntBASIC3.53□□□□□ -1.84
MSH6P52701 UBE2V1P15-201ENST00000407776 448 ntBASIC3.53□□□□□ -1.84
MSH6P52701 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.53□□□□□ -1.84
MSH6P52701 ST13P20-201ENST00000447996 1065 ntBASIC3.53□□□□□ -1.84
MSH6P52701 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.53□□□□□ -1.84
MSH6P52701 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.53□□□□□ -1.84
MSH6P52701 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.53□□□□□ -1.84
MSH6P52701 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.53□□□□□ -1.84
MSH6P52701 AC111193.1-201ENST00000504097 155 ntBASIC3.53□□□□□ -1.84
MSH6P52701 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.53□□□□□ -1.84
MSH6P52701 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.53□□□□□ -1.84
MSH6P52701 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.53□□□□□ -1.84
MSH6P52701 OR4U1P-201ENST00000554958 912 ntBASIC3.53□□□□□ -1.84
MSH6P52701 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.53□□□□□ -1.84
MSH6P52701 AL161713.1-201ENST00000555538 145 ntBASIC3.53□□□□□ -1.84
MSH6P52701 AADACP1-206ENST00000561502 1193 ntBASIC3.53□□□□□ -1.84
MSH6P52701 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.53□□□□□ -1.84
MSH6P52701 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.53□□□□□ -1.84
MSH6P52701 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.53□□□□□ -1.84
MSH6P52701 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.53□□□□□ -1.84
MSH6P52701 AC005046.1-201ENST00000608515 625 ntBASIC3.53□□□□□ -1.84
MSH6P52701 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.53□□□□□ -1.84
MSH6P52701 AC004696.1-201ENST00000614345 607 ntBASIC3.53□□□□□ -1.84
MSH6P52701 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.53□□□□□ -1.84
MSH6P52701 XPOTP1-201ENST00000443317 2398 ntBASIC3.53□□□□□ -1.84
MSH6P52701 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MSH6P52701 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
MSH6P52701 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
MSH6P52701 AL359511.1-201ENST00000402970 211 ntBASIC3.52□□□□□ -1.85
MSH6P52701 SDCBPP3-201ENST00000419629 891 ntBASIC3.52□□□□□ -1.85
MSH6P52701 AC132942.1-201ENST00000486753 483 ntBASIC3.52□□□□□ -1.85
MSH6P52701 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MSH6P52701 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH6P52701 AC009163.5-201ENST00000575421 637 ntBASIC3.52□□□□□ -1.85
MSH6P52701 MIR3605-201ENST00000583214 100 ntBASIC3.52□□□□□ -1.85
MSH6P52701 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.52□□□□□ -1.85
MSH6P52701 AC018618.2-201ENST00000604770 446 ntBASIC3.52□□□□□ -1.85
MSH6P52701 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
MSH6P52701 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.52□□□□□ -1.85
MSH6P52701 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.51□□□□□ -1.85
MSH6P52701 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.51□□□□□ -1.85
MSH6P52701 AC092832.1-201ENST00000422934 400 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AC097499.1-201ENST00000444277 208 ntBASIC3.51□□□□□ -1.85
MSH6P52701 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.51□□□□□ -1.85
MSH6P52701 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 AC008716.1-201ENST00000511084 513 ntBASIC3.51□□□□□ -1.85
MSH6P52701 RN7SKP219-201ENST00000516825 296 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.51□□□□□ -1.85
MSH6P52701 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.51□□□□□ -1.85
MSH6P52701 OR5AK3P-201ENST00000527486 1297 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.51□□□□□ -1.85
MSH6P52701 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MSH6P52701 NF1P5-201ENST00000588287 448 ntBASIC3.51□□□□□ -1.85
MSH6P52701 AP001033.2-201ENST00000609701 1003 ntBASIC3.51□□□□□ -1.85
MSH6P52701 U6.48-201ENST00000618523 106 ntBASIC3.51□□□□□ -1.85
MSH6P52701 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MSH6P52701 AC109315.1-201ENST00000584143 1347 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms