Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NEK3P51956 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.4□□□□□ -1.71
NEK3P51956 AC068790.3-201ENST00000602988 553 ntBASIC4.4□□□□□ -1.71
NEK3P51956 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC090425.2-201ENST00000608818 501 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC004908.2-201ENST00000609090 574 ntBASIC4.4□□□□□ -1.71
NEK3P51956 OR10AB1P-201ENST00000609613 938 ntBASIC4.4□□□□□ -1.71
NEK3P51956 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.4□□□□□ -1.71
NEK3P51956 AC009090.3-201ENST00000616553 565 ntBASIC4.4□□□□□ -1.71
NEK3P51956 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK3P51956 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK3P51956 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NEK3P51956 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK3P51956 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NEK3P51956 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.4□□□□□ -1.71
NEK3P51956 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK3P51956 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK3P51956 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEK3P51956 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.39□□□□□ -1.71
NEK3P51956 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.39□□□□□ -1.71
NEK3P51956 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.39□□□□□ -1.71
NEK3P51956 AC008725.1-201ENST00000605123 2263 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AC005832.2-201ENST00000538921 1430 ntBASIC4.39□□□□□ -1.71
NEK3P51956 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEK3P51956 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.39□□□□□ -1.71
NEK3P51956 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
NEK3P51956 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEK3P51956 AC106871.1-201ENST00000568324 3102 ntBASIC4.39□□□□□ -1.71
NEK3P51956 RNU4-40P-201ENST00000364351 143 ntBASIC4.39□□□□□ -1.71
NEK3P51956 RNU6-533P-201ENST00000384144 107 ntBASIC4.39□□□□□ -1.71
NEK3P51956 RPL7AP73-201ENST00000413490 353 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.39□□□□□ -1.71
NEK3P51956 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.39□□□□□ -1.71
NEK3P51956 AL353777.1-201ENST00000425552 326 ntBASIC4.39□□□□□ -1.71
NEK3P51956 RPL23AP52-201ENST00000439311 478 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK3P51956 RAC1P7-201ENST00000445367 377 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK3P51956 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK3P51956 AC239367.2-201ENST00000447309 705 ntBASIC4.39□□□□□ -1.71
NEK3P51956 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK3P51956 AC073387.1-201ENST00000453261 709 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.39□□□□□ -1.71
NEK3P51956 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEK3P51956 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.39□□□□□ -1.71
NEK3P51956 AC114967.1-201ENST00000504890 259 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AC117522.2-201ENST00000510049 657 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.39□□□□□ -1.71
NEK3P51956 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.39□□□□□ -1.71
NEK3P51956 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.39□□□□□ -1.71
NEK3P51956 AC011468.4-201ENST00000603942 409 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AC138749.5-201ENST00000611461 208 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AC093838.1-201ENST00000613014 469 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AC025594.3-201ENST00000613068 790 ntBASIC4.39□□□□□ -1.71
NEK3P51956 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NEK3P51956 AC116165.2-201ENST00000616705 206 ntBASIC4.39□□□□□ -1.71
NEK3P51956 AL445567.2-201ENST00000618935 498 ntBASIC4.39□□□□□ -1.71
NEK3P51956 MIR3653-201ENST00000625572 110 ntBASIC4.39□□□□□ -1.71
NEK3P51956 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEK3P51956 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEK3P51956 AC009812.4-201ENST00000569134 1805 ntBASIC4.39□□□□□ -1.71
NEK3P51956 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEK3P51956 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEK3P51956 AL138713.1-201ENST00000624026 2130 ntBASIC4.39□□□□□ -1.71
NEK3P51956 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEK3P51956 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NEK3P51956 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NEK3P51956 AC095050.2-201ENST00000510748 1458 ntBASIC4.38□□□□□ -1.71
NEK3P51956 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NEK3P51956 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
NEK3P51956 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEK3P51956 RNU6-50P-201ENST00000362356 103 ntBASIC4.38□□□□□ -1.71
NEK3P51956 Y_RNA.46-201ENST00000362695 102 ntBASIC4.38□□□□□ -1.71
NEK3P51956 RNU6-809P-201ENST00000384461 107 ntBASIC4.38□□□□□ -1.71
NEK3P51956 SNORD66.1-201ENST00000391230 76 ntBASIC4.38□□□□□ -1.71
NEK3P51956 MTCYBP36-201ENST00000404146 440 ntBASIC4.38□□□□□ -1.71
NEK3P51956 RPL7P25-201ENST00000404151 721 ntBASIC4.38□□□□□ -1.71
NEK3P51956 RPS3AP24-201ENST00000407896 734 ntBASIC4.38□□□□□ -1.71
NEK3P51956 RNU4-65P-201ENST00000410473 140 ntBASIC4.38□□□□□ -1.71
NEK3P51956 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.38□□□□□ -1.71
NEK3P51956 RPS7P13-201ENST00000413955 498 ntBASIC4.38□□□□□ -1.71
NEK3P51956 CRYBB2P1-203ENST00000415709 538 ntBASIC4.38□□□□□ -1.71
NEK3P51956 SSXP9-201ENST00000417503 292 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.38□□□□□ -1.71
NEK3P51956 OR4K11P-201ENST00000431829 904 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AC090774.1-201ENST00000435925 246 ntBASIC4.38□□□□□ -1.71
NEK3P51956 CYCSP43-201ENST00000438233 310 ntBASIC4.38□□□□□ -1.71
NEK3P51956 RPL22P17-201ENST00000438729 315 ntBASIC4.38□□□□□ -1.71
NEK3P51956 NUTF2P3-201ENST00000448540 384 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AC103987.1-201ENST00000473394 348 ntBASIC4.38□□□□□ -1.71
NEK3P51956 RPS4XP13-201ENST00000483219 789 ntBASIC4.38□□□□□ -1.71
NEK3P51956 RPL35P6-201ENST00000490024 372 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AC091167.1-201ENST00000492017 396 ntBASIC4.38□□□□□ -1.71
NEK3P51956 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NEK3P51956 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.38□□□□□ -1.71
NEK3P51956 NPM1P41-201ENST00000512920 831 ntBASIC4.38□□□□□ -1.71
NEK3P51956 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.38□□□□□ -1.71
NEK3P51956 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.38□□□□□ -1.71
NEK3P51956 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.38□□□□□ -1.71
NEK3P51956 AC022878.1-201ENST00000530684 149 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms