Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RNU6-4P-201ENST00000384205 107 ntBASIC2.27□□□□□ -2.05
CENPFP49454 RNU6-5P-201ENST00000384238 107 ntBASIC2.27□□□□□ -2.05
CENPFP49454 RNU6-3P-201ENST00000384314 107 ntBASIC2.27□□□□□ -2.05
CENPFP49454 RNU6-2-201ENST00000384627 107 ntBASIC2.27□□□□□ -2.05
CENPFP49454 RNU6-9-201ENST00000384776 107 ntBASIC2.27□□□□□ -2.05
CENPFP49454 RNU6-33P-201ENST00000384793 107 ntBASIC2.27□□□□□ -2.05
CENPFP49454 RAC1P3-201ENST00000416129 580 ntBASIC2.27□□□□□ -2.05
CENPFP49454 AC008173.1-201ENST00000418901 264 ntBASIC2.27□□□□□ -2.05
CENPFP49454 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.27□□□□□ -2.05
CENPFP49454 AC092798.1-201ENST00000458542 409 ntBASIC2.27□□□□□ -2.05
CENPFP49454 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.27□□□□□ -2.05
CENPFP49454 RNU6-6P-201ENST00000606623 107 ntBASIC2.27□□□□□ -2.05
CENPFP49454 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.26□□□□□ -2.05
CENPFP49454 AL358453.1-201ENST00000422522 250 ntBASIC2.26□□□□□ -2.05
CENPFP49454 AC133473.1-201ENST00000455173 299 ntBASIC2.26□□□□□ -2.05
CENPFP49454 RNU7-95P-201ENST00000459222 64 ntBASIC2.26□□□□□ -2.05
CENPFP49454 RNA5SP61-201ENST00000516453 100 ntBASIC2.26□□□□□ -2.05
CENPFP49454 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.26□□□□□ -2.05
CENPFP49454 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.26□□□□□ -2.05
CENPFP49454 AC055876.1-202ENST00000567053 138 ntBASIC2.26□□□□□ -2.05
CENPFP49454 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.26□□□□□ -2.05
CENPFP49454 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.26□□□□□ -2.05
CENPFP49454 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CENPFP49454 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.26□□□□□ -2.05
CENPFP49454 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.26□□□□□ -2.05
CENPFP49454 AL353597.2-202ENST00000434901 373 ntBASIC2.26□□□□□ -2.05
CENPFP49454 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.26□□□□□ -2.05
CENPFP49454 MTAPP1-201ENST00000489154 819 ntBASIC2.26□□□□□ -2.05
CENPFP49454 TMEM248P1-201ENST00000510579 951 ntBASIC2.26□□□□□ -2.05
CENPFP49454 RNA5SP182-201ENST00000516064 82 ntBASIC2.26□□□□□ -2.05
CENPFP49454 RNA5SP220-201ENST00000516298 104 ntBASIC2.26□□□□□ -2.05
CENPFP49454 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
CENPFP49454 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CENPFP49454 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CENPFP49454 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CENPFP49454 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.25□□□□□ -2.05
CENPFP49454 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.25□□□□□ -2.05
CENPFP49454 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.25□□□□□ -2.05
CENPFP49454 AC135279.1-201ENST00000543493 504 ntBASIC2.25□□□□□ -2.05
CENPFP49454 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.25□□□□□ -2.05
CENPFP49454 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.25□□□□□ -2.05
CENPFP49454 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.25□□□□□ -2.05
CENPFP49454 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CENPFP49454 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.25□□□□□ -2.05
CENPFP49454 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.25□□□□□ -2.05
CENPFP49454 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CENPFP49454 SAR1AP2-201ENST00000392696 594 ntBASIC2.25□□□□□ -2.05
CENPFP49454 RPL23AP48-201ENST00000406913 488 ntBASIC2.25□□□□□ -2.05
CENPFP49454 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
CENPFP49454 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.25□□□□□ -2.05
CENPFP49454 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.25□□□□□ -2.05
CENPFP49454 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.25□□□□□ -2.05
CENPFP49454 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
CENPFP49454 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
CENPFP49454 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CENPFP49454 Y_RNA.205-201ENST00000364128 113 ntBASIC2.25□□□□□ -2.05
CENPFP49454 AL023807.1-201ENST00000407932 359 ntBASIC2.25□□□□□ -2.05
CENPFP49454 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.25□□□□□ -2.05
CENPFP49454 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC2.25□□□□□ -2.05
CENPFP49454 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CENPFP49454 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CENPFP49454 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
CENPFP49454 U8.8-201ENST00000365399 135 ntBASIC2.24□□□□□ -2.05
CENPFP49454 Y_RNA.354-201ENST00000365448 111 ntBASIC2.24□□□□□ -2.05
CENPFP49454 RNU1-57P-201ENST00000384491 166 ntBASIC2.24□□□□□ -2.05
CENPFP49454 RPS7P5-201ENST00000441482 581 ntBASIC2.24□□□□□ -2.05
CENPFP49454 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.24□□□□□ -2.05
CENPFP49454 AC092185.1-201ENST00000491371 97 ntBASIC2.24□□□□□ -2.05
CENPFP49454 RPAP2P1-201ENST00000603626 1168 ntBASIC2.24□□□□□ -2.05
CENPFP49454 MIR8081-201ENST00000611533 95 ntBASIC2.24□□□□□ -2.05
CENPFP49454 OR1S1-201ENST00000624470 978 ntBASIC2.24□□□□□ -2.05
CENPFP49454 CYP3A51P-201ENST00000633513 256 ntBASIC2.24□□□□□ -2.05
CENPFP49454 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CENPFP49454 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CENPFP49454 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CENPFP49454 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CENPFP49454 Y_RNA.191-201ENST00000363972 113 ntBASIC2.24□□□□□ -2.05
CENPFP49454 RNU2-6P-201ENST00000411404 190 ntBASIC2.24□□□□□ -2.05
CENPFP49454 HMGB1P11-201ENST00000413899 637 ntBASIC2.24□□□□□ -2.05
CENPFP49454 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.24□□□□□ -2.05
CENPFP49454 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.24□□□□□ -2.05
CENPFP49454 RPS7P2-201ENST00000435134 607 ntBASIC2.24□□□□□ -2.05
CENPFP49454 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.24□□□□□ -2.05
CENPFP49454 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.24□□□□□ -2.05
CENPFP49454 DNAJC19P9-201ENST00000555084 351 ntBASIC2.24□□□□□ -2.05
CENPFP49454 LRRC37A5P-203ENST00000580181 585 ntBASIC2.24□□□□□ -2.05
CENPFP49454 MIR6515-201ENST00000619843 57 ntBASIC2.24□□□□□ -2.05
CENPFP49454 MIR3199-2-201ENST00000636243 86 ntBASIC2.24□□□□□ -2.05
CENPFP49454 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CENPFP49454 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CENPFP49454 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.23□□□□□ -2.05
CENPFP49454 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CENPFP49454 MTND4LP16-201ENST00000440828 295 ntBASIC2.23□□□□□ -2.05
CENPFP49454 PPP1R2P5-201ENST00000457256 603 ntBASIC2.23□□□□□ -2.05
CENPFP49454 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.23□□□□□ -2.05
CENPFP49454 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.23□□□□□ -2.05
CENPFP49454 MIR4452-201ENST00000583004 71 ntBASIC2.23□□□□□ -2.05
CENPFP49454 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.23□□□□□ -2.05
CENPFP49454 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC2.23□□□□□ -2.05
CENPFP49454 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms