Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNA5SP306-201ENST00000411087 107 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 RPL36AP36-201ENST00000418616 301 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 OR8F1P-201ENST00000425243 930 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBEC1P41238 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.61□□□□□ -1.83
APOBEC1P41238 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBEC1P41238 HMGB1P37-201ENST00000439613 609 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 GDI2P2-201ENST00000445131 608 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 ST13P20-201ENST00000447996 1065 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBEC1P41238 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBEC1P41238 HMGB3P22-202ENST00000451823 572 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 AC133473.1-201ENST00000455173 299 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 DNAJC19P1-201ENST00000455312 319 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 SNRPFP4-201ENST00000456366 242 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 AC110792.1-201ENST00000491826 472 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 AL132838.2-201ENST00000492041 314 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBEC1P41238 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBEC1P41238 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.61□□□□□ -1.83
APOBEC1P41238 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBEC1P41238 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBEC1P41238 IGHV3-32-201ENST00000519182 355 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBEC1P41238 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBEC1P41238 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBEC1P41238 AC136624.4-201ENST00000573044 370 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.61□□□□□ -1.83
APOBEC1P41238 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBEC1P41238 MIR6867-201ENST00000610636 67 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 AL591424.2-201ENST00000617023 128 ntBASIC3.61□□□□□ -1.83
APOBEC1P41238 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.61□□□□□ -1.83
APOBEC1P41238 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
APOBEC1P41238 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBEC1P41238 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBEC1P41238 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
APOBEC1P41238 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.61□□□□□ -1.83
APOBEC1P41238 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
APOBEC1P41238 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
APOBEC1P41238 AP002001.2-201ENST00000529025 1469 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AC244517.1-201ENST00000606030 2086 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 RLIMP1-201ENST00000339626 1680 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 RNU6-623P-201ENST00000363143 105 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 RNA5SP317-201ENST00000410176 116 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 RNA5SP311-201ENST00000411290 116 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 RPS7P13-201ENST00000413955 498 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AL513174.1-201ENST00000423182 629 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.6□□□□□ -1.83
APOBEC1P41238 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 AL691449.1-201ENST00000426570 421 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 KCTD9P3-201ENST00000434597 1169 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 AC108734.1-201ENST00000439549 399 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 FAM103A2P-201ENST00000444122 354 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AC004069.2-201ENST00000505438 1114 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 FABP5P5-201ENST00000515537 406 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 RNA5SP315-201ENST00000516340 116 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 RNA5SP312-201ENST00000517068 116 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 MIR2116-201ENST00000517221 80 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBEC1P41238 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.6□□□□□ -1.83
APOBEC1P41238 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBEC1P41238 AC006362.1-201ENST00000567392 174 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 RSL24D1P11-201ENST00000591045 491 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 AC087752.4-201ENST00000605911 462 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 HMGN2P28-201ENST00000606102 262 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBEC1P41238 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
APOBEC1P41238 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.6□□□□□ -1.83
APOBEC1P41238 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
APOBEC1P41238 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
APOBEC1P41238 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.6□□□□□ -1.83
APOBEC1P41238 CCT4P2-201ENST00000233836 1548 ntBASIC3.6□□□□□ -1.83
APOBEC1P41238 IPO8P1-201ENST00000455509 3109 ntBASIC3.59□□□□□ -1.83
APOBEC1P41238 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBEC1P41238 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.59□□□□□ -1.83
APOBEC1P41238 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
APOBEC1P41238 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.59□□□□□ -1.83
APOBEC1P41238 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms