Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RPL39P6-201ENST00000448289 150 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.65□□□□□ -1.83
HNF4AP41235 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.65□□□□□ -1.83
HNF4AP41235 RPL12P26-201ENST00000452430 487 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.65□□□□□ -1.83
HNF4AP41235 SUMO2P2-201ENST00000456482 255 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AC026410.2-201ENST00000460281 156 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 RPS15AP17-201ENST00000470598 390 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 RN7SL132P-201ENST00000478131 296 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.65□□□□□ -1.83
HNF4AP41235 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.65□□□□□ -1.83
HNF4AP41235 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.65□□□□□ -1.83
HNF4AP41235 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.65□□□□□ -1.83
HNF4AP41235 RAC1P2-201ENST00000511164 579 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.65□□□□□ -1.83
HNF4AP41235 AC108043.1-201ENST00000512696 574 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.65□□□□□ -1.83
HNF4AP41235 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.65□□□□□ -1.83
HNF4AP41235 MTND4LP31-201ENST00000514859 294 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HNF4AP41235 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HNF4AP41235 ERHP1-201ENST00000523006 310 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HNF4AP41235 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HNF4AP41235 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.65□□□□□ -1.83
HNF4AP41235 AP005205.1-201ENST00000563503 508 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AL354943.1-201ENST00000572103 781 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.65□□□□□ -1.83
HNF4AP41235 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.65□□□□□ -1.83
HNF4AP41235 AC022916.3-201ENST00000592961 742 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.65□□□□□ -1.83
HNF4AP41235 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.65□□□□□ -1.83
HNF4AP41235 MIR6798-201ENST00000612887 67 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 AC078883.4-201ENST00000623218 367 ntBASIC3.65□□□□□ -1.83
HNF4AP41235 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.65□□□□□ -1.83
HNF4AP41235 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HNF4AP41235 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.65□□□□□ -1.83
HNF4AP41235 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HNF4AP41235 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HNF4AP41235 AC090740.1-201ENST00000623193 2262 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 OR4G11P-202ENST00000642116 1414 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HNF4AP41235 FAM133CP-201ENST00000332869 704 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 RNU6-216P-201ENST00000363282 104 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 Y_RNA.169-201ENST00000363745 96 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 SNORA57.1-201ENST00000391227 145 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.64□□□□□ -1.83
HNF4AP41235 AC007435.1-201ENST00000421086 415 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.64□□□□□ -1.83
HNF4AP41235 UBE2D3P2-201ENST00000424409 445 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 MUPP-201ENST00000438111 566 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AL008629.1-201ENST00000438615 184 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.64□□□□□ -1.83
HNF4AP41235 AL121871.1-201ENST00000443413 436 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AL359073.1-201ENST00000448036 403 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.64□□□□□ -1.83
HNF4AP41235 ART2BP-201ENST00000453501 499 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.64□□□□□ -1.83
HNF4AP41235 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.64□□□□□ -1.83
HNF4AP41235 MTCYBP16-201ENST00000509187 1129 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 NPM1P41-201ENST00000512920 831 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AC008837.2-201ENST00000513076 418 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.64□□□□□ -1.83
HNF4AP41235 PDCL2P2-201ENST00000533651 189 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.64□□□□□ -1.83
HNF4AP41235 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.64□□□□□ -1.83
HNF4AP41235 HSPE1P5-201ENST00000561489 272 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AC006960.3-201ENST00000561845 705 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AL132657.2-201ENST00000564417 358 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AC099489.2-201ENST00000574976 260 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 MIR5685-201ENST00000579080 79 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
HNF4AP41235 SNORA62.6-201ENST00000606322 83 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AC080013.3-201ENST00000606839 578 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AL450489.1-201ENST00000612071 468 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 AP000676.3-201ENST00000623299 569 ntBASIC3.64□□□□□ -1.83
HNF4AP41235 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HNF4AP41235 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.64□□□□□ -1.83
HNF4AP41235 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HNF4AP41235 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HNF4AP41235 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.64□□□□□ -1.83
HNF4AP41235 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HNF4AP41235 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HNF4AP41235 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.63□□□□□ -1.83
HNF4AP41235 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HNF4AP41235 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HNF4AP41235 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HNF4AP41235 RNU5D-1-201ENST00000363299 116 ntBASIC3.63□□□□□ -1.83
HNF4AP41235 Y_RNA.192-201ENST00000363977 102 ntBASIC3.63□□□□□ -1.83
HNF4AP41235 RPS3AP26-201ENST00000398259 784 ntBASIC3.63□□□□□ -1.83
HNF4AP41235 RSL24D1P4-201ENST00000400938 484 ntBASIC3.63□□□□□ -1.83
HNF4AP41235 AC127526.1-201ENST00000417526 366 ntBASIC3.63□□□□□ -1.83
HNF4AP41235 MTND2P18-201ENST00000419962 1030 ntBASIC3.63□□□□□ -1.83
HNF4AP41235 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.63□□□□□ -1.83
HNF4AP41235 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.63□□□□□ -1.83
HNF4AP41235 RPL23AP76-201ENST00000441860 458 ntBASIC3.63□□□□□ -1.83
HNF4AP41235 ATG12P2-201ENST00000456830 416 ntBASIC3.63□□□□□ -1.83
HNF4AP41235 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.63□□□□□ -1.83
HNF4AP41235 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms