Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFC3P40938 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.86□□□□□ -1.95
RFC3P40938 SNORA31.26-201ENST00000517250 137 ntBASIC2.86□□□□□ -1.95
RFC3P40938 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.86□□□□□ -1.95
RFC3P40938 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.86□□□□□ -1.95
RFC3P40938 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.86□□□□□ -1.95
RFC3P40938 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
RFC3P40938 EIF4BP1-201ENST00000554881 351 ntBASIC2.86□□□□□ -1.95
RFC3P40938 AP001029.3-201ENST00000588063 596 ntBASIC2.86□□□□□ -1.95
RFC3P40938 AP002906.1-201ENST00000603405 233 ntBASIC2.86□□□□□ -1.95
RFC3P40938 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.86□□□□□ -1.95
RFC3P40938 AC006329.2-201ENST00000611491 394 ntBASIC2.86□□□□□ -1.95
RFC3P40938 AL360181.4-201ENST00000621752 134 ntBASIC2.86□□□□□ -1.95
RFC3P40938 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.86□□□□□ -1.95
RFC3P40938 AL590396.4-201ENST00000636779 956 ntBASIC2.86□□□□□ -1.95
RFC3P40938 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
RFC3P40938 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFC3P40938 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RFC3P40938 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.85□□□□□ -1.95
RFC3P40938 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RFC3P40938 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RFC3P40938 AC009487.2-201ENST00000420969 6821 ntBASIC2.85□□□□□ -1.95
RFC3P40938 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RFC3P40938 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.85□□□□□ -1.95
RFC3P40938 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFC3P40938 RNU6-115P-201ENST00000364310 107 ntBASIC2.85□□□□□ -1.95
RFC3P40938 RNU6-609P-201ENST00000365459 107 ntBASIC2.85□□□□□ -1.95
RFC3P40938 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC3P40938 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RFC3P40938 U3.26-201ENST00000391236 204 ntBASIC2.85□□□□□ -1.95
RFC3P40938 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
RFC3P40938 AL354719.1-201ENST00000406535 843 ntBASIC2.85□□□□□ -1.95
RFC3P40938 COTL1P1-201ENST00000422309 375 ntBASIC2.85□□□□□ -1.95
RFC3P40938 RPL35AP12-201ENST00000425362 338 ntBASIC2.85□□□□□ -1.95
RFC3P40938 DUTP6-201ENST00000425573 462 ntBASIC2.85□□□□□ -1.95
RFC3P40938 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFC3P40938 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC3P40938 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC3P40938 AC108734.1-201ENST00000439549 399 ntBASIC2.85□□□□□ -1.95
RFC3P40938 RPL23AP16-201ENST00000441715 421 ntBASIC2.85□□□□□ -1.95
RFC3P40938 RPL17P49-201ENST00000443728 411 ntBASIC2.85□□□□□ -1.95
RFC3P40938 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.85□□□□□ -1.95
RFC3P40938 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC3P40938 MTCO3P2-201ENST00000457365 171 ntBASIC2.85□□□□□ -1.95
RFC3P40938 RPL21P8-201ENST00000465083 535 ntBASIC2.85□□□□□ -1.95
RFC3P40938 AC078857.1-201ENST00000469870 667 ntBASIC2.85□□□□□ -1.95
RFC3P40938 AC098799.1-201ENST00000504752 800 ntBASIC2.85□□□□□ -1.95
RFC3P40938 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC3P40938 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RFC3P40938 AC121161.1-201ENST00000510606 652 ntBASIC2.85□□□□□ -1.95
RFC3P40938 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.85□□□□□ -1.95
RFC3P40938 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC3P40938 OR8K2P-201ENST00000524645 927 ntBASIC2.85□□□□□ -1.95
RFC3P40938 AC019227.1-201ENST00000526902 510 ntBASIC2.85□□□□□ -1.95
RFC3P40938 ZNF705CP-201ENST00000530515 889 ntBASIC2.85□□□□□ -1.95
RFC3P40938 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.85□□□□□ -1.95
RFC3P40938 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.85□□□□□ -1.95
RFC3P40938 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.85□□□□□ -1.95
RFC3P40938 AC092474.3-201ENST00000603022 568 ntBASIC2.85□□□□□ -1.95
RFC3P40938 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.85□□□□□ -1.95
RFC3P40938 AL137790.1-201ENST00000634283 177 ntBASIC2.85□□□□□ -1.95
RFC3P40938 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RFC3P40938 OR5BR1P-201ENST00000524992 1330 ntBASIC2.85□□□□□ -1.95
RFC3P40938 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RFC3P40938 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.85□□□□□ -1.95
RFC3P40938 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RFC3P40938 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RFC3P40938 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RFC3P40938 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RFC3P40938 SNORA7.4-201ENST00000384249 137 ntBASIC2.84□□□□□ -1.95
RFC3P40938 RNU6-712P-201ENST00000410558 100 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AL133384.1-201ENST00000412744 351 ntBASIC2.84□□□□□ -1.95
RFC3P40938 BX664727.1-201ENST00000416024 466 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.84□□□□□ -1.95
RFC3P40938 AC006960.1-201ENST00000419980 153 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AL139281.1-201ENST00000422120 335 ntBASIC2.84□□□□□ -1.95
RFC3P40938 RPL31P54-201ENST00000429803 370 ntBASIC2.84□□□□□ -1.95
RFC3P40938 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.84□□□□□ -1.95
RFC3P40938 AC022018.1-201ENST00000430685 241 ntBASIC2.84□□□□□ -1.95
RFC3P40938 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RFC3P40938 RPL21P2-201ENST00000440049 481 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AC016696.1-201ENST00000446949 318 ntBASIC2.84□□□□□ -1.95
RFC3P40938 OR51B8P-201ENST00000449892 769 ntBASIC2.84□□□□□ -1.95
RFC3P40938 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.84□□□□□ -1.95
RFC3P40938 RPS20P24-201ENST00000457473 361 ntBASIC2.84□□□□□ -1.95
RFC3P40938 SNORA59A-201ENST00000459326 152 ntBASIC2.84□□□□□ -1.95
RFC3P40938 RN7SL75P-201ENST00000461926 281 ntBASIC2.84□□□□□ -1.95
RFC3P40938 HMGB1P25-201ENST00000468402 607 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AC011825.1-201ENST00000484967 388 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AC096751.1-202ENST00000502691 1067 ntBASIC2.84□□□□□ -1.95
RFC3P40938 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.84□□□□□ -1.95
RFC3P40938 AC118282.2-201ENST00000508739 374 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.84□□□□□ -1.95
RFC3P40938 RN7SKP272-201ENST00000516988 232 ntBASIC2.84□□□□□ -1.95
RFC3P40938 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.84□□□□□ -1.95
RFC3P40938 ARL2BPP5-201ENST00000523141 481 ntBASIC2.84□□□□□ -1.95
RFC3P40938 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.84□□□□□ -1.95
RFC3P40938 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
RFC3P40938 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.84□□□□□ -1.95
RFC3P40938 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms