Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 OR2AS2P-201ENST00000606902 342 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AC245389.2-201ENST00000616023 576 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AC243756.2-201ENST00000618406 463 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AC242843.1-201ENST00000618702 573 ntBASIC1.93□□□□□ -2.1
SNCAP37840 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.93□□□□□ -2.1
SNCAP37840 AP000553.5-201ENST00000641933 54 ntBASIC1.93□□□□□ -2.1
SNCAP37840 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
SNCAP37840 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
SNCAP37840 AC104446.1-201ENST00000613728 1321 ntBASIC1.92□□□□□ -2.1
SNCAP37840 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.92□□□□□ -2.1
SNCAP37840 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNCAP37840 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNCAP37840 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.92□□□□□ -2.1
SNCAP37840 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNCAP37840 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.92□□□□□ -2.1
SNCAP37840 Z75741.2-201ENST00000417272 1167 ntBASIC1.92□□□□□ -2.1
SNCAP37840 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC1.92□□□□□ -2.1
SNCAP37840 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNCAP37840 TPMTP4-201ENST00000450749 678 ntBASIC1.92□□□□□ -2.1
SNCAP37840 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
SNCAP37840 RPS24P6-201ENST00000452670 400 ntBASIC1.92□□□□□ -2.1
SNCAP37840 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.92□□□□□ -2.1
SNCAP37840 AC090255.1-201ENST00000495779 349 ntBASIC1.92□□□□□ -2.1
SNCAP37840 GZMAP1-201ENST00000503054 631 ntBASIC1.92□□□□□ -2.1
SNCAP37840 MTND3P24-201ENST00000506306 329 ntBASIC1.92□□□□□ -2.1
SNCAP37840 RNA5SP24-201ENST00000516478 95 ntBASIC1.92□□□□□ -2.1
SNCAP37840 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.92□□□□□ -2.1
SNCAP37840 MTCO1P47-201ENST00000523889 1271 ntBASIC1.92□□□□□ -2.1
SNCAP37840 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SNCAP37840 AP000889.2-201ENST00000532684 490 ntBASIC1.92□□□□□ -2.1
SNCAP37840 GTF3AP2-201ENST00000557014 266 ntBASIC1.92□□□□□ -2.1
SNCAP37840 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.92□□□□□ -2.1
SNCAP37840 AC025281.1-201ENST00000567026 265 ntBASIC1.92□□□□□ -2.1
SNCAP37840 AC105137.2-201ENST00000569073 466 ntBASIC1.92□□□□□ -2.1
SNCAP37840 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.92□□□□□ -2.1
SNCAP37840 AC008962.1-201ENST00000605729 304 ntBASIC1.92□□□□□ -2.1
SNCAP37840 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SNCAP37840 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNCAP37840 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.91□□□□□ -2.1
SNCAP37840 AC087565.3-202ENST00000642085 1603 ntBASIC1.91□□□□□ -2.1
SNCAP37840 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SNCAP37840 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
SNCAP37840 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SNCAP37840 MTCO1P6-201ENST00000481192 1384 ntBASIC1.91□□□□□ -2.1
SNCAP37840 AL512646.1-201ENST00000269395 1077 ntBASIC1.91□□□□□ -2.1
SNCAP37840 OR5J1P-201ENST00000313544 939 ntBASIC1.91□□□□□ -2.1
SNCAP37840 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.91□□□□□ -2.1
SNCAP37840 RNU6-50P-201ENST00000362356 103 ntBASIC1.91□□□□□ -2.1
SNCAP37840 AC008280.1-201ENST00000418851 412 ntBASIC1.91□□□□□ -2.1
SNCAP37840 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.91□□□□□ -2.1
SNCAP37840 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.91□□□□□ -2.1
SNCAP37840 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.91□□□□□ -2.1
SNCAP37840 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.91□□□□□ -2.1
SNCAP37840 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.91□□□□□ -2.1
SNCAP37840 AC107083.1-201ENST00000439643 279 ntBASIC1.91□□□□□ -2.1
SNCAP37840 PGBD4P3-201ENST00000440731 581 ntBASIC1.91□□□□□ -2.1
SNCAP37840 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.91□□□□□ -2.1
SNCAP37840 ELOCP13-201ENST00000443934 329 ntBASIC1.91□□□□□ -2.1
SNCAP37840 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.91□□□□□ -2.1
SNCAP37840 NPM1P13-201ENST00000452663 865 ntBASIC1.91□□□□□ -2.1
SNCAP37840 XKRY-201ENST00000510392 1100 ntBASIC1.91□□□□□ -2.1
SNCAP37840 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.91□□□□□ -2.1
SNCAP37840 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.91□□□□□ -2.1
SNCAP37840 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.91□□□□□ -2.1
SNCAP37840 AC061975.8-201ENST00000587058 721 ntBASIC1.91□□□□□ -2.1
SNCAP37840 VN1R90P-201ENST00000595717 726 ntBASIC1.91□□□□□ -2.1
SNCAP37840 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.91□□□□□ -2.1
SNCAP37840 AC010620.2-201ENST00000600135 313 ntBASIC1.91□□□□□ -2.1
SNCAP37840 AL392112.1-201ENST00000605115 829 ntBASIC1.91□□□□□ -2.1
SNCAP37840 MIR6840-201ENST00000611937 71 ntBASIC1.91□□□□□ -2.1
SNCAP37840 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SNCAP37840 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SNCAP37840 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.91□□□□□ -2.1
SNCAP37840 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SNCAP37840 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
SNCAP37840 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
SNCAP37840 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
SNCAP37840 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SNCAP37840 MIR128-1-201ENST00000384921 82 ntBASIC1.9□□□□□ -2.11
SNCAP37840 MIR627-201ENST00000384979 97 ntBASIC1.9□□□□□ -2.11
SNCAP37840 MIR34A-201ENST00000385130 110 ntBASIC1.9□□□□□ -2.11
SNCAP37840 DNAJC19P6-201ENST00000401853 280 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AL359511.1-201ENST00000402970 211 ntBASIC1.9□□□□□ -2.11
SNCAP37840 RNU2-52P-201ENST00000410680 190 ntBASIC1.9□□□□□ -2.11
SNCAP37840 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.9□□□□□ -2.11
SNCAP37840 COTL1P1-201ENST00000422309 375 ntBASIC1.9□□□□□ -2.11
SNCAP37840 MTATP6P11-201ENST00000428071 670 ntBASIC1.9□□□□□ -2.11
SNCAP37840 SRIP2-201ENST00000428470 166 ntBASIC1.9□□□□□ -2.11
SNCAP37840 TRBV26-201ENST00000456572 344 ntBASIC1.9□□□□□ -2.11
SNCAP37840 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.9□□□□□ -2.11
SNCAP37840 GAPDHP39-201ENST00000481866 979 ntBASIC1.9□□□□□ -2.11
SNCAP37840 RPS3AP14-201ENST00000483907 780 ntBASIC1.9□□□□□ -2.11
SNCAP37840 MRPL42P6-201ENST00000486397 371 ntBASIC1.9□□□□□ -2.11
SNCAP37840 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SNCAP37840 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.9□□□□□ -2.11
SNCAP37840 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.9□□□□□ -2.11
SNCAP37840 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.9□□□□□ -2.11
SNCAP37840 RN7SKP277-201ENST00000516895 283 ntBASIC1.9□□□□□ -2.11
SNCAP37840 RNA5SP471-201ENST00000516971 106 ntBASIC1.9□□□□□ -2.11
SNCAP37840 NPM1P52-201ENST00000518264 846 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms