Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC109315.1-201ENST00000584143 1347 ntBASIC2.74□□□□□ -1.97
RPA3P35244 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
RPA3P35244 SNORA25.6-201ENST00000364121 118 ntBASIC2.74□□□□□ -1.97
RPA3P35244 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RPA3P35244 MTND4P13-201ENST00000402078 1023 ntBASIC2.74□□□□□ -1.97
RPA3P35244 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.74□□□□□ -1.97
RPA3P35244 UBE2V1P9-201ENST00000414760 368 ntBASIC2.74□□□□□ -1.97
RPA3P35244 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.74□□□□□ -1.97
RPA3P35244 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.74□□□□□ -1.97
RPA3P35244 UBE2D3P2-201ENST00000424409 445 ntBASIC2.74□□□□□ -1.97
RPA3P35244 RPL21P40-201ENST00000428586 483 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.74□□□□□ -1.97
RPA3P35244 RPL21P2-201ENST00000440049 481 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AL136126.1-201ENST00000473603 402 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AC090525.1-201ENST00000479116 478 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.74□□□□□ -1.97
RPA3P35244 AC104108.1-201ENST00000509930 412 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AC004217.3-201ENST00000551552 878 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.74□□□□□ -1.97
RPA3P35244 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.74□□□□□ -1.97
RPA3P35244 AL513477.2-201ENST00000607858 568 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AL451074.6-201ENST00000608512 729 ntBASIC2.74□□□□□ -1.97
RPA3P35244 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.74□□□□□ -1.97
RPA3P35244 AC090116.1-201ENST00000615679 446 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AC018755.4-201ENST00000619715 454 ntBASIC2.74□□□□□ -1.97
RPA3P35244 AL162233.1-201ENST00000620014 944 ntBASIC2.74□□□□□ -1.97
RPA3P35244 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.74□□□□□ -1.97
RPA3P35244 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
RPA3P35244 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
RPA3P35244 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.74□□□□□ -1.97
RPA3P35244 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.73□□□□□ -1.97
RPA3P35244 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.73□□□□□ -1.97
RPA3P35244 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.73□□□□□ -1.97
RPA3P35244 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
RPA3P35244 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPA3P35244 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPA3P35244 RNU6-1249P-201ENST00000363237 111 ntBASIC2.73□□□□□ -1.97
RPA3P35244 RNU4-65P-201ENST00000410473 140 ntBASIC2.73□□□□□ -1.97
RPA3P35244 TATDN1P1-201ENST00000414123 891 ntBASIC2.73□□□□□ -1.97
RPA3P35244 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.73□□□□□ -1.97
RPA3P35244 RPS23P3-201ENST00000470993 430 ntBASIC2.73□□□□□ -1.97
RPA3P35244 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.73□□□□□ -1.97
RPA3P35244 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.73□□□□□ -1.97
RPA3P35244 OR5H5P-201ENST00000503164 928 ntBASIC2.73□□□□□ -1.97
RPA3P35244 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.73□□□□□ -1.97
RPA3P35244 AC104986.1-201ENST00000517978 436 ntBASIC2.73□□□□□ -1.97
RPA3P35244 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.73□□□□□ -1.97
RPA3P35244 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.73□□□□□ -1.97
RPA3P35244 ATP5F1P7-201ENST00000567330 760 ntBASIC2.73□□□□□ -1.97
RPA3P35244 MIR3670-2-201ENST00000582974 65 ntBASIC2.73□□□□□ -1.97
RPA3P35244 MIR3670-1-201ENST00000584160 65 ntBASIC2.73□□□□□ -1.97
RPA3P35244 SNORD84-203ENST00000584275 78 ntBASIC2.73□□□□□ -1.97
RPA3P35244 MIR3670-3-201ENST00000584855 65 ntBASIC2.73□□□□□ -1.97
RPA3P35244 AL356575.1-201ENST00000603008 283 ntBASIC2.73□□□□□ -1.97
RPA3P35244 MIR3670-4-201ENST00000612260 65 ntBASIC2.73□□□□□ -1.97
RPA3P35244 MIR1264-201ENST00000616374 69 ntBASIC2.73□□□□□ -1.97
RPA3P35244 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.73□□□□□ -1.97
RPA3P35244 AC073569.3-201ENST00000619055 682 ntBASIC2.73□□□□□ -1.97
RPA3P35244 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
RPA3P35244 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPA3P35244 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
RPA3P35244 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
RPA3P35244 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.72□□□□□ -1.97
RPA3P35244 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPA3P35244 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPA3P35244 RNVU1-3-201ENST00000364313 161 ntBASIC2.72□□□□□ -1.97
RPA3P35244 FNDC3CP-201ENST00000420795 1155 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AL645937.1-202ENST00000421799 937 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC073310.1-201ENST00000423226 1033 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC006548.1-201ENST00000427470 102 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.72□□□□□ -1.97
RPA3P35244 MTND4LP7-201ENST00000431728 294 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.72□□□□□ -1.97
RPA3P35244 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.72□□□□□ -1.97
RPA3P35244 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.72□□□□□ -1.97
RPA3P35244 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.72□□□□□ -1.97
RPA3P35244 MTND5P8-201ENST00000449817 1083 ntBASIC2.72□□□□□ -1.97
RPA3P35244 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.72□□□□□ -1.97
RPA3P35244 RPS3AP14-201ENST00000483907 780 ntBASIC2.72□□□□□ -1.97
RPA3P35244 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPA3P35244 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.72□□□□□ -1.97
RPA3P35244 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.72□□□□□ -1.97
RPA3P35244 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.72□□□□□ -1.97
RPA3P35244 AC117522.3-201ENST00000507974 584 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.72□□□□□ -1.97
RPA3P35244 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.72□□□□□ -1.97
RPA3P35244 AC103833.1-201ENST00000517442 172 ntBASIC2.72□□□□□ -1.97
RPA3P35244 HIGD1AP6-201ENST00000521833 279 ntBASIC2.72□□□□□ -1.97
RPA3P35244 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.72□□□□□ -1.97
RPA3P35244 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.72□□□□□ -1.97
RPA3P35244 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.72□□□□□ -1.97
RPA3P35244 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.72□□□□□ -1.97
RPA3P35244 AC233266.2-201ENST00000567067 528 ntBASIC2.72□□□□□ -1.97
RPA3P35244 COX6CP3-201ENST00000580869 223 ntBASIC2.72□□□□□ -1.97
RPA3P35244 BDH2P1-201ENST00000602288 736 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC128687.1-201ENST00000605304 619 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC008962.1-201ENST00000605729 304 ntBASIC2.72□□□□□ -1.97
RPA3P35244 BX664608.1-201ENST00000610519 487 ntBASIC2.72□□□□□ -1.97
RPA3P35244 AC095031.1-201ENST00000623685 672 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms