Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF4P23510 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF4P23510 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AC008549.2-201ENST00000333482 706 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 SNORA20.2-201ENST00000383922 131 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 SNORA36C-201ENST00000384289 132 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 U3.30-201ENST00000391308 210 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 RNU6-195P-201ENST00000411352 109 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 MTND3P17-201ENST00000416968 344 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 BX295541.1-201ENST00000417774 250 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AC008850.1-201ENST00000427546 362 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFSF4P23510 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AL049714.1-201ENST00000466686 347 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 MTND2P33-201ENST00000506452 1031 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 HMGB3P16-201ENST00000508037 287 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AC114797.1-201ENST00000514003 728 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 RNU2-10P-201ENST00000516375 211 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AC005868.1-201ENST00000536421 331 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AC128657.1-201ENST00000549459 145 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AL391156.1-201ENST00000554965 554 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AC009063.1-201ENST00000563342 702 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 CYCSP40-201ENST00000575927 294 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 RN7SL176P-201ENST00000580352 264 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 MIR4270-201ENST00000581799 70 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 MIR4293-201ENST00000584305 78 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 BNIP3P33-201ENST00000598912 569 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 BDH2P1-201ENST00000602288 736 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AC024940.4-201ENST00000605507 246 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AC013476.2-201ENST00000614456 459 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AC099842.1-201ENST00000619919 596 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 FRG1KP-201ENST00000623592 341 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AC084035.1-201ENST00000634543 607 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TNFSF4P23510 AL672296.1-201ENST00000427780 2158 ntBASIC4.07□□□□□ -1.76
TNFSF4P23510 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF4P23510 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.07□□□□□ -1.76
TNFSF4P23510 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF4P23510 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TNFSF4P23510 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.07□□□□□ -1.76
TNFSF4P23510 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF4P23510 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF4P23510 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFSF4P23510 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TNFSF4P23510 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF4P23510 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.06□□□□□ -1.76
TNFSF4P23510 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF4P23510 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TNFSF4P23510 RNU1-94P-201ENST00000362627 173 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 SNORA71.2-201ENST00000364941 134 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 DEFB109C-201ENST00000382575 264 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 DEFB109B-201ENST00000382656 264 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TNFSF4P23510 RN7SKP33-201ENST00000410942 340 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AL591848.1-201ENST00000413092 322 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 USP9YP36-201ENST00000424581 829 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 RPL7L1P10-201ENST00000427790 463 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AL360081.1-201ENST00000428299 555 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 USP9YP9-201ENST00000429406 715 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AC004938.1-201ENST00000438468 308 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AC104651.2-201ENST00000447549 528 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFSF4P23510 MTCYBP1-201ENST00000454315 1119 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 RPL35AP28-201ENST00000459730 331 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AL358832.1-201ENST00000497800 389 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AC105252.1-201ENST00000503089 286 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.06□□□□□ -1.76
TNFSF4P23510 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AC093012.1-202ENST00000549403 582 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AC087883.1-201ENST00000551882 391 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.06□□□□□ -1.76
TNFSF4P23510 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.06□□□□□ -1.76
TNFSF4P23510 MIR5699-201ENST00000578903 90 ntBASIC4.06□□□□□ -1.76
TNFSF4P23510 ZNF415P1-201ENST00000582279 1166 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms