Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXD8P13378 RPS29P33-201ENST00000456717 146 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 RNU7-59P-201ENST00000459101 61 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC104057.1-201ENST00000515547 497 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 RNU6-635P-201ENST00000516651 102 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXD8P13378 MIR4330-201ENST00000579077 105 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD8P13378 NUTF2P8-201ENST00000604593 363 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC011890.2-201ENST00000613393 294 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AC010378.1-201ENST00000619270 362 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 AC011155.2-201ENST00000623202 216 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD8P13378 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXD8P13378 AL592148.3-201ENST00000608771 2646 ntBASIC5.68□□□□□ -1.5
HOXD8P13378 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
HOXD8P13378 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXD8P13378 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXD8P13378 AC239868.2-201ENST00000564237 4527 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HOXD8P13378 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HOXD8P13378 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HOXD8P13378 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 PNPT1P2-201ENST00000456768 2050 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD8P13378 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD8P13378 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD8P13378 Y_RNA.5-201ENST00000362334 102 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 RNU6-1115P-201ENST00000362490 106 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 RNU6-238P-201ENST00000363313 106 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 RN7SKP113-201ENST00000363891 295 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 SNORA75B-201ENST00000384053 137 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD8P13378 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXD8P13378 AL139095.3-201ENST00000419672 1203 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 RAC1P6-201ENST00000423911 575 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 AL031736.2-201ENST00000426573 787 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 AC091390.1-201ENST00000433904 331 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 AC138761.5-201ENST00000433967 325 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXD8P13378 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD8P13378 MTND1P17-201ENST00000448961 204 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 RN7SL197P-201ENST00000466981 299 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXD8P13378 IGKV1-32-201ENST00000519290 311 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 FAM60DP-201ENST00000524174 632 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 PSMA6P4-201ENST00000603247 718 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 AL031320.1-201ENST00000604177 357 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 AC100812.1-201ENST00000607622 580 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD8P13378 AL590099.1-201ENST00000615276 138 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 HMGB1P24-202ENST00000615653 685 ntBASIC5.67□□□□□ -1.5
HOXD8P13378 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXD8P13378 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXD8P13378 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXD8P13378 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD8P13378 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD8P13378 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD8P13378 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD8P13378 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXD8P13378 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXD8P13378 OR9K1P-202ENST00000641111 3217 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXD8P13378 RNA5SP391-201ENST00000363456 119 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 RNU6-82P-201ENST00000363970 107 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HOXD8P13378 RNU6-1293P-201ENST00000384077 107 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 MIR192-201ENST00000384915 110 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 HMGB3P2-201ENST00000411913 584 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 DPH3P2-201ENST00000422618 250 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 PDSS1P1-201ENST00000422953 1114 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 SKA2P1-201ENST00000425592 390 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXD8P13378 RPS29P9-201ENST00000440360 171 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 AC011753.3-201ENST00000443436 406 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 AL031584.1-201ENST00000447169 754 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 RPL5P30-201ENST00000465511 891 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 RN7SL346P-201ENST00000491561 294 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 AC104806.1-201ENST00000508720 308 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 OR7H2P-201ENST00000513483 306 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 RNU6-347P-201ENST00000516658 105 ntBASIC5.66□□□□□ -1.5
HOXD8P13378 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.66□□□□□ -1.5
HOXD8P13378 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXD8P13378 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXD8P13378 AC106782.4-201ENST00000568264 210 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms