Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
BMP3P12645 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BMP3P12645 AC093671.1-201ENST00000624981 2929 ntBASIC5.61□□□□□ -1.51
BMP3P12645 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BMP3P12645 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BMP3P12645 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BMP3P12645 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
BMP3P12645 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 AL590240.1-201ENST00000334118 313 ntBASIC5.6□□□□□ -1.51
BMP3P12645 Y_RNA.5-201ENST00000362334 102 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RNU6-984P-201ENST00000363236 109 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RNU6-1188P-201ENST00000363795 107 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RNU6-379P-201ENST00000363813 104 ntBASIC5.6□□□□□ -1.51
BMP3P12645 Y_RNA.176-201ENST00000363815 109 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RNU4-66P-201ENST00000365199 138 ntBASIC5.6□□□□□ -1.51
BMP3P12645 DEFB109C-201ENST00000382575 264 ntBASIC5.6□□□□□ -1.51
BMP3P12645 DEFB109B-201ENST00000382656 264 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RNU6-317P-201ENST00000384031 107 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RNU6-1032P-201ENST00000384100 107 ntBASIC5.6□□□□□ -1.51
BMP3P12645 SNORD3H-201ENST00000384486 214 ntBASIC5.6□□□□□ -1.51
BMP3P12645 Y_RNA.530-201ENST00000384587 101 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RPL31P52-201ENST00000407532 367 ntBASIC5.6□□□□□ -1.51
BMP3P12645 AC074085.1-201ENST00000413598 418 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RPS15AP12-201ENST00000419498 388 ntBASIC5.6□□□□□ -1.51
BMP3P12645 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BMP3P12645 AL645608.4-201ENST00000423619 154 ntBASIC5.6□□□□□ -1.51
BMP3P12645 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.6□□□□□ -1.51
BMP3P12645 TXNP1-201ENST00000441872 371 ntBASIC5.6□□□□□ -1.51
BMP3P12645 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.6□□□□□ -1.51
BMP3P12645 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.6□□□□□ -1.51
BMP3P12645 RPL12P20-201ENST00000475538 479 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RN7SL459P-201ENST00000481078 302 ntBASIC5.6□□□□□ -1.51
BMP3P12645 RN7SL558P-201ENST00000497468 299 ntBASIC5.6□□□□□ -1.51
BMP3P12645 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.6□□□□□ -1.51
BMP3P12645 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.6□□□□□ -1.51
BMP3P12645 AC091885.1-201ENST00000506658 268 ntBASIC5.6□□□□□ -1.51
BMP3P12645 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 RNU6-202P-201ENST00000515998 96 ntBASIC5.6□□□□□ -1.51
BMP3P12645 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.6□□□□□ -1.51
BMP3P12645 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.6□□□□□ -1.51
BMP3P12645 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.6□□□□□ -1.51
BMP3P12645 AP002404.1-201ENST00000532005 451 ntBASIC5.6□□□□□ -1.51
BMP3P12645 LARP7P2-201ENST00000575306 125 ntBASIC5.6□□□□□ -1.51
BMP3P12645 MIR5699-201ENST00000578903 90 ntBASIC5.6□□□□□ -1.51
BMP3P12645 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.6□□□□□ -1.51
BMP3P12645 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.6□□□□□ -1.51
BMP3P12645 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 AC008745.1-201ENST00000604064 271 ntBASIC5.6□□□□□ -1.51
BMP3P12645 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BMP3P12645 AC007546.1-201ENST00000619452 559 ntBASIC5.6□□□□□ -1.51
BMP3P12645 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.6□□□□□ -1.51
BMP3P12645 SMG1P6-201ENST00000532337 2930 ntBASIC5.6□□□□□ -1.51
BMP3P12645 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.6□□□□□ -1.51
BMP3P12645 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BMP3P12645 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BMP3P12645 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BMP3P12645 MTND5P19-201ENST00000424872 1794 ntBASIC5.6□□□□□ -1.51
BMP3P12645 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.59□□□□□ -1.51
BMP3P12645 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BMP3P12645 AC004972.1-201ENST00000623934 2209 ntBASIC5.59□□□□□ -1.51
BMP3P12645 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BMP3P12645 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BMP3P12645 AC083843.2-201ENST00000568248 6253 ntBASIC5.59□□□□□ -1.51
BMP3P12645 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
BMP3P12645 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BMP3P12645 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BMP3P12645 SET-203ENST00000372688 801 ntTSL 2 BASIC5.59□□□□□ -1.51
BMP3P12645 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BMP3P12645 MIR548I3-201ENST00000408378 149 ntBASIC5.59□□□□□ -1.51
BMP3P12645 MIR548I1-201ENST00000408810 149 ntBASIC5.59□□□□□ -1.51
BMP3P12645 RPL37P10-201ENST00000412884 288 ntBASIC5.59□□□□□ -1.51
BMP3P12645 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.59□□□□□ -1.51
BMP3P12645 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.59□□□□□ -1.51
BMP3P12645 AC092162.1-201ENST00000432828 434 ntBASIC5.59□□□□□ -1.51
BMP3P12645 AC010881.1-201ENST00000433830 235 ntBASIC5.59□□□□□ -1.51
BMP3P12645 RPS17P8-201ENST00000434525 335 ntBASIC5.59□□□□□ -1.51
BMP3P12645 AC016831.4-201ENST00000438302 307 ntBASIC5.59□□□□□ -1.51
BMP3P12645 HMGB3P11-201ENST00000440127 604 ntBASIC5.59□□□□□ -1.51
BMP3P12645 CYCSP24-201ENST00000445119 316 ntBASIC5.59□□□□□ -1.51
BMP3P12645 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.59□□□□□ -1.51
BMP3P12645 Y_RNA.653-201ENST00000459091 95 ntBASIC5.59□□□□□ -1.51
BMP3P12645 AC073073.1-201ENST00000493920 463 ntBASIC5.59□□□□□ -1.51
BMP3P12645 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.59□□□□□ -1.51
BMP3P12645 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.59□□□□□ -1.51
BMP3P12645 MRPS35P2-201ENST00000508242 191 ntBASIC5.59□□□□□ -1.51
BMP3P12645 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.59□□□□□ -1.51
BMP3P12645 AC107222.1-201ENST00000510899 637 ntBASIC5.59□□□□□ -1.51
BMP3P12645 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.59□□□□□ -1.51
BMP3P12645 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.59□□□□□ -1.51
BMP3P12645 RNU6-976P-201ENST00000516086 111 ntBASIC5.59□□□□□ -1.51
BMP3P12645 RANP9-201ENST00000519957 271 ntBASIC5.59□□□□□ -1.51
BMP3P12645 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.59□□□□□ -1.51
BMP3P12645 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.59□□□□□ -1.51
BMP3P12645 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms