Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RB1P06400 AL356473.1-201ENST00000406203 1408 ntBASIC3.95□□□□□ -1.78
RB1P06400 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RB1P06400 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.95□□□□□ -1.78
RB1P06400 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RB1P06400 RNA5SP189-201ENST00000364920 115 ntBASIC3.95□□□□□ -1.78
RB1P06400 RNA5SP424-201ENST00000390988 115 ntBASIC3.95□□□□□ -1.78
RB1P06400 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.95□□□□□ -1.78
RB1P06400 EI24P1-201ENST00000416584 867 ntBASIC3.95□□□□□ -1.78
RB1P06400 AC245054.1-201ENST00000420944 258 ntBASIC3.95□□□□□ -1.78
RB1P06400 AC019178.2-201ENST00000423595 505 ntBASIC3.95□□□□□ -1.78
RB1P06400 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.95□□□□□ -1.78
RB1P06400 KCTD9P3-201ENST00000434597 1169 ntBASIC3.95□□□□□ -1.78
RB1P06400 AC005019.1-201ENST00000436455 431 ntBASIC3.95□□□□□ -1.78
RB1P06400 YWHAZP7-201ENST00000436906 631 ntBASIC3.95□□□□□ -1.78
RB1P06400 SNORA71B-202ENST00000439232 272 ntBASIC3.95□□□□□ -1.78
RB1P06400 MTCYBP34-201ENST00000439552 670 ntBASIC3.95□□□□□ -1.78
RB1P06400 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.95□□□□□ -1.78
RB1P06400 RPS17P13-201ENST00000448974 407 ntBASIC3.95□□□□□ -1.78
RB1P06400 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.95□□□□□ -1.78
RB1P06400 HMGN2P7-201ENST00000456186 273 ntBASIC3.95□□□□□ -1.78
RB1P06400 CEACAMP4-201ENST00000457676 421 ntBASIC3.95□□□□□ -1.78
RB1P06400 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.95□□□□□ -1.78
RB1P06400 snoU109.4-201ENST00000458953 143 ntBASIC3.95□□□□□ -1.78
RB1P06400 RPL21P10-201ENST00000463521 490 ntBASIC3.95□□□□□ -1.78
RB1P06400 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RB1P06400 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.95□□□□□ -1.78
RB1P06400 RPL7P24-201ENST00000493052 752 ntBASIC3.95□□□□□ -1.78
RB1P06400 AC147055.4-201ENST00000504399 745 ntBASIC3.95□□□□□ -1.78
RB1P06400 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RB1P06400 AC098862.1-201ENST00000504991 413 ntBASIC3.95□□□□□ -1.78
RB1P06400 AC025554.1-201ENST00000505641 188 ntBASIC3.95□□□□□ -1.78
RB1P06400 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.95□□□□□ -1.78
RB1P06400 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.95□□□□□ -1.78
RB1P06400 RNU6-150P-201ENST00000516237 95 ntBASIC3.95□□□□□ -1.78
RB1P06400 AC022861.1-201ENST00000522981 663 ntBASIC3.95□□□□□ -1.78
RB1P06400 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.95□□□□□ -1.78
RB1P06400 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RB1P06400 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.95□□□□□ -1.78
RB1P06400 AC011611.1-201ENST00000552179 197 ntBASIC3.95□□□□□ -1.78
RB1P06400 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.95□□□□□ -1.78
RB1P06400 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.95□□□□□ -1.78
RB1P06400 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.95□□□□□ -1.78
RB1P06400 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.95□□□□□ -1.78
RB1P06400 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.95□□□□□ -1.78
RB1P06400 MIR8058-201ENST00000615737 89 ntBASIC3.95□□□□□ -1.78
RB1P06400 AL136981.2-201ENST00000617319 734 ntBASIC3.95□□□□□ -1.78
RB1P06400 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RB1P06400 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RB1P06400 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RB1P06400 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RB1P06400 AC097714.1-201ENST00000511272 1647 ntBASIC3.95□□□□□ -1.78
RB1P06400 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
RB1P06400 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RB1P06400 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RB1P06400 AC027287.1-201ENST00000553115 1453 ntBASIC3.94□□□□□ -1.78
RB1P06400 LINC02471-203ENST00000641941 4752 ntBASIC3.94□□□□□ -1.78
RB1P06400 SNORD51-201ENST00000384320 80 ntBASIC3.94□□□□□ -1.78
RB1P06400 SOD2P1-201ENST00000396543 562 ntBASIC3.94□□□□□ -1.78
RB1P06400 JKAMPP1-201ENST00000413804 919 ntBASIC3.94□□□□□ -1.78
RB1P06400 TPMTP2-201ENST00000414372 726 ntBASIC3.94□□□□□ -1.78
RB1P06400 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.94□□□□□ -1.78
RB1P06400 TXNL1P1-201ENST00000429528 554 ntBASIC3.94□□□□□ -1.78
RB1P06400 ATP5HP2-201ENST00000433885 485 ntBASIC3.94□□□□□ -1.78
RB1P06400 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.94□□□□□ -1.78
RB1P06400 HSPE1P28-201ENST00000443139 211 ntBASIC3.94□□□□□ -1.78
RB1P06400 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.94□□□□□ -1.78
RB1P06400 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.94□□□□□ -1.78
RB1P06400 VN1R40P-201ENST00000455196 941 ntBASIC3.94□□□□□ -1.78
RB1P06400 AL109741.2-201ENST00000455561 343 ntBASIC3.94□□□□□ -1.78
RB1P06400 BTF3P5-201ENST00000457252 467 ntBASIC3.94□□□□□ -1.78
RB1P06400 HMGB1P25-201ENST00000468402 607 ntBASIC3.94□□□□□ -1.78
RB1P06400 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.94□□□□□ -1.78
RB1P06400 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.94□□□□□ -1.78
RB1P06400 AC005921.1-201ENST00000510589 286 ntBASIC3.94□□□□□ -1.78
RB1P06400 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.94□□□□□ -1.78
RB1P06400 AC026407.1-201ENST00000518369 204 ntBASIC3.94□□□□□ -1.78
RB1P06400 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RB1P06400 OR4P1P-201ENST00000530808 1136 ntBASIC3.94□□□□□ -1.78
RB1P06400 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.94□□□□□ -1.78
RB1P06400 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.94□□□□□ -1.78
RB1P06400 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.94□□□□□ -1.78
RB1P06400 AC024224.1-201ENST00000538284 609 ntBASIC3.94□□□□□ -1.78
RB1P06400 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.94□□□□□ -1.78
RB1P06400 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.94□□□□□ -1.78
RB1P06400 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
RB1P06400 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.94□□□□□ -1.78
RB1P06400 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.94□□□□□ -1.78
RB1P06400 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.94□□□□□ -1.78
RB1P06400 AC008147.4-201ENST00000617570 1204 ntBASIC3.94□□□□□ -1.78
RB1P06400 AC017037.3-201ENST00000625016 472 ntBASIC3.94□□□□□ -1.78
RB1P06400 SCARNA15.3-201ENST00000626315 122 ntBASIC3.94□□□□□ -1.78
RB1P06400 SCARNA4.1-201ENST00000628597 123 ntBASIC3.94□□□□□ -1.78
RB1P06400 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RB1P06400 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.94□□□□□ -1.78
RB1P06400 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RB1P06400 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms