Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TRBV26-201ENST00000456572 344 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 RPL21P41-201ENST00000459863 264 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 RN7SL863P-201ENST00000462370 296 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC010285.1-201ENST00000470580 392 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 SUMO2P5-201ENST00000506790 245 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC010265.1-201ENST00000513509 211 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 SNORA31.20-201ENST00000517111 133 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 RNU6-1073P-201ENST00000517182 106 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 IGHV3-76-201ENST00000522465 295 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 ARL2BPP5-201ENST00000523141 481 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 ZNF705CP-201ENST00000530515 889 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 SULT1C2P1-202ENST00000562418 459 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 MTCO3P13-201ENST00000577757 781 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 CCDC58P3-201ENST00000590792 430 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 PRELID3BP8-201ENST00000604148 295 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC008083.4-201ENST00000615076 444 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AP002371.2-201ENST00000624450 503 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC048347.1-201ENST00000624621 427 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 CR381572.1-201ENST00000625098 102 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 MTND5P1-201ENST00000445440 1375 ntBASIC2.7□□□□□ -1.98
HLA-DPB1P04440 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DPB1P04440 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC093010.3-201ENST00000570269 15214 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC005183.1-201ENST00000603687 1979 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 SNORD46.1-201ENST00000364139 104 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 SNORD82-201ENST00000365530 70 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 RPL7P25-201ENST00000404151 721 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 RNA5SP129-201ENST00000410276 118 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC007390.1-201ENST00000415722 356 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC011242.1-201ENST00000433596 1158 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AL590103.1-201ENST00000434488 307 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC004022.1-201ENST00000447766 1066 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 RPS24P6-201ENST00000452670 400 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 GSTA11P-201ENST00000452866 669 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 RN7SL504P-201ENST00000494496 287 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 MTND2P7-201ENST00000521337 640 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 OR5G4P-201ENST00000525251 760 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 NDUFS5P6-201ENST00000529136 295 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC087481.2-201ENST00000565492 330 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 LARP7P2-201ENST00000575306 125 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC023043.3-201ENST00000593113 385 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AL031985.2-201ENST00000600955 480 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC092954.1-201ENST00000609121 445 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC006329.2-201ENST00000611491 394 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AL592148.2-201ENST00000612210 372 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC107871.2-201ENST00000612894 502 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AL138955.1-201ENST00000622881 1040 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC040168.1-201ENST00000623594 991 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AL512506.2-201ENST00000624472 458 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC026634.1-201ENST00000634369 198 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 AC106858.1-201ENST00000637497 429 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 MTND2P41-201ENST00000637599 773 ntBASIC2.69□□□□□ -1.98
HLA-DPB1P04440 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPB1P04440 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 AP001350.1-201ENST00000601906 1524 ntBASIC2.68□□□□□ -1.98
HLA-DPB1P04440 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPB1P04440 HMGB1P5-201ENST00000255320 642 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms