Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC092447.7-201ENST00000422212 1621 ntBASIC2.62□□□□□ -1.99
CD74P04233 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.62□□□□□ -1.99
CD74P04233 AC108206.1-201ENST00000570186 4159 ntBASIC2.62□□□□□ -1.99
CD74P04233 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CD74P04233 MIR208A-201ENST00000362287 71 ntBASIC2.62□□□□□ -1.99
CD74P04233 RNU5B-4P-201ENST00000363508 111 ntBASIC2.62□□□□□ -1.99
CD74P04233 Y_RNA.493-201ENST00000384422 102 ntBASIC2.62□□□□□ -1.99
CD74P04233 RNU6-441P-201ENST00000384545 106 ntBASIC2.62□□□□□ -1.99
CD74P04233 SNORA26.7-201ENST00000391288 122 ntBASIC2.62□□□□□ -1.99
CD74P04233 RPS3AP25-201ENST00000411660 793 ntBASIC2.62□□□□□ -1.99
CD74P04233 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.62□□□□□ -1.99
CD74P04233 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CD74P04233 AC114973.1-201ENST00000429057 632 ntBASIC2.62□□□□□ -1.99
CD74P04233 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.62□□□□□ -1.99
CD74P04233 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.62□□□□□ -1.99
CD74P04233 AL592437.1-201ENST00000443781 492 ntBASIC2.62□□□□□ -1.99
CD74P04233 COX6CP2-201ENST00000444980 225 ntBASIC2.62□□□□□ -1.99
CD74P04233 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.62□□□□□ -1.99
CD74P04233 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.62□□□□□ -1.99
CD74P04233 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.62□□□□□ -1.99
CD74P04233 GSTA11P-201ENST00000452866 669 ntBASIC2.62□□□□□ -1.99
CD74P04233 NDUFA5P7-201ENST00000452914 242 ntBASIC2.62□□□□□ -1.99
CD74P04233 HMGN3P1-201ENST00000453847 193 ntBASIC2.62□□□□□ -1.99
CD74P04233 RN7SL20P-201ENST00000488827 297 ntBASIC2.62□□□□□ -1.99
CD74P04233 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.62□□□□□ -1.99
CD74P04233 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.62□□□□□ -1.99
CD74P04233 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.62□□□□□ -1.99
CD74P04233 MTND2P7-201ENST00000521337 640 ntBASIC2.62□□□□□ -1.99
CD74P04233 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.62□□□□□ -1.99
CD74P04233 AP003066.2-201ENST00000529375 555 ntBASIC2.62□□□□□ -1.99
CD74P04233 HIGD1AP1-201ENST00000550979 275 ntBASIC2.62□□□□□ -1.99
CD74P04233 GTF2IP22-201ENST00000554443 182 ntBASIC2.62□□□□□ -1.99
CD74P04233 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.62□□□□□ -1.99
CD74P04233 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.62□□□□□ -1.99
CD74P04233 ZNF971P-201ENST00000562068 1249 ntBASIC2.62□□□□□ -1.99
CD74P04233 AL157394.1-201ENST00000562983 1224 ntBASIC2.62□□□□□ -1.99
CD74P04233 AC083760.1-201ENST00000589621 670 ntBASIC2.62□□□□□ -1.99
CD74P04233 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.62□□□□□ -1.99
CD74P04233 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.62□□□□□ -1.99
CD74P04233 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.62□□□□□ -1.99
CD74P04233 AC099785.1-201ENST00000605697 437 ntBASIC2.62□□□□□ -1.99
CD74P04233 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CD74P04233 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CD74P04233 MIR6076-201ENST00000617521 113 ntBASIC2.62□□□□□ -1.99
CD74P04233 AC015967.1-201ENST00000619893 476 ntBASIC2.62□□□□□ -1.99
CD74P04233 AL360181.4-201ENST00000621752 134 ntBASIC2.62□□□□□ -1.99
CD74P04233 AC098679.5-201ENST00000624394 571 ntBASIC2.62□□□□□ -1.99
CD74P04233 AP000720.1-201ENST00000625091 483 ntBASIC2.62□□□□□ -1.99
CD74P04233 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.62□□□□□ -1.99
CD74P04233 AL392088.2-201ENST00000637607 285 ntBASIC2.62□□□□□ -1.99
CD74P04233 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CD74P04233 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CD74P04233 CUL1P1-201ENST00000509510 2425 ntBASIC2.62□□□□□ -1.99
CD74P04233 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CD74P04233 AL645568.2-201ENST00000432815 1337 ntBASIC2.62□□□□□ -1.99
CD74P04233 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CD74P04233 SGO1P2-201ENST00000429458 1589 ntBASIC2.61□□□□□ -1.99
CD74P04233 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CD74P04233 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CD74P04233 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CD74P04233 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CD74P04233 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CD74P04233 RNU6-1027P-201ENST00000383998 107 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC110754.1-201ENST00000399740 601 ntBASIC2.61□□□□□ -1.99
CD74P04233 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
CD74P04233 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.61□□□□□ -1.99
CD74P04233 SFR1P2-201ENST00000421841 730 ntBASIC2.61□□□□□ -1.99
CD74P04233 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.61□□□□□ -1.99
CD74P04233 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.61□□□□□ -1.99
CD74P04233 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.61□□□□□ -1.99
CD74P04233 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.61□□□□□ -1.99
CD74P04233 RPL21P2-201ENST00000440049 481 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC092641.1-201ENST00000440229 772 ntBASIC2.61□□□□□ -1.99
CD74P04233 RPL39P40-201ENST00000445481 146 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC004022.1-201ENST00000447766 1066 ntBASIC2.61□□□□□ -1.99
CD74P04233 PRSS3P4-201ENST00000453323 162 ntBASIC2.61□□□□□ -1.99
CD74P04233 RPL21P41-201ENST00000459863 264 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.61□□□□□ -1.99
CD74P04233 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.61□□□□□ -1.99
CD74P04233 AC104629.1-201ENST00000494226 508 ntBASIC2.61□□□□□ -1.99
CD74P04233 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.61□□□□□ -1.99
CD74P04233 AC093801.2-201ENST00000503966 1050 ntBASIC2.61□□□□□ -1.99
CD74P04233 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 AC118282.2-201ENST00000508739 374 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.61□□□□□ -1.99
CD74P04233 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.61□□□□□ -1.99
CD74P04233 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.61□□□□□ -1.99
CD74P04233 OR8K4P-201ENST00000534608 872 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.61□□□□□ -1.99
CD74P04233 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.61□□□□□ -1.99
CD74P04233 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.61□□□□□ -1.99
CD74P04233 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.61□□□□□ -1.99
CD74P04233 AC090079.2-201ENST00000575289 768 ntBASIC2.61□□□□□ -1.99
CD74P04233 MTCO3P13-201ENST00000577757 781 ntBASIC2.61□□□□□ -1.99
CD74P04233 MIR4276-201ENST00000584832 70 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC008507.2-201ENST00000588402 1176 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC090330.1-201ENST00000588646 764 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms