Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
COL4A1P02462 RNU6-1159P-201ENST00000362933 107 ntBASIC2.51□□□□□ -2.01
COL4A1P02462 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A1P02462 MIR9-3-201ENST00000385084 90 ntBASIC2.51□□□□□ -2.01
COL4A1P02462 RNA5SP344-201ENST00000411081 104 ntBASIC2.51□□□□□ -2.01
COL4A1P02462 MIR4506-201ENST00000584693 77 ntBASIC2.51□□□□□ -2.01
COL4A1P02462 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.51□□□□□ -2.01
COL4A1P02462 AC011494.1-201ENST00000596454 237 ntBASIC2.51□□□□□ -2.01
COL4A1P02462 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.51□□□□□ -2.01
COL4A1P02462 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.51□□□□□ -2.01
COL4A1P02462 AL136964.1-201ENST00000622038 2990 ntBASIC2.51□□□□□ -2.01
COL4A1P02462 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.51□□□□□ -2.01
COL4A1P02462 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A1P02462 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A1P02462 RNU1-17P-201ENST00000363022 152 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
COL4A1P02462 SPA17P1-201ENST00000416656 452 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 AL592045.1-201ENST00000429867 352 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 AL353597.2-202ENST00000434901 373 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 RN7SKP210-201ENST00000459176 261 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 SCARNA17.1-201ENST00000516211 143 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 SCARNA17.2-201ENST00000516334 143 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
COL4A1P02462 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A1P02462 MTND2P17-201ENST00000550281 688 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 GMCL1P2-201ENST00000605230 823 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 SCARNA17.4-201ENST00000614296 143 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A1P02462 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A1P02462 RNU6-1320P-201ENST00000390838 107 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 RNU6-1269P-201ENST00000391139 107 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A1P02462 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A1P02462 AC007677.1-201ENST00000445757 515 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 HMGB1P48-201ENST00000446155 598 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.5□□□□□ -2.01
COL4A1P02462 RNU6-599P-201ENST00000459383 107 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 RNU6-1193P-201ENST00000459461 107 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 TRBV8-1-201ENST00000481590 279 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A1P02462 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A1P02462 RN7SKP219-201ENST00000516825 296 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 RNU6-943P-201ENST00000516960 98 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A1P02462 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A1P02462 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A1P02462 AP001004.1-201ENST00000582468 324 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 RNU6-368P-201ENST00000620928 107 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 RNU6-538P-201ENST00000622329 107 ntBASIC2.5□□□□□ -2.01
COL4A1P02462 OR4G2P-202ENST00000641004 1759 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL4A1P02462 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.49□□□□□ -2.01
COL4A1P02462 SNORA48.3-201ENST00000391081 134 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 NPM1P10-201ENST00000398310 865 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A1P02462 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A1P02462 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.49□□□□□ -2.01
COL4A1P02462 SNRPFP2-201ENST00000440710 251 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 AL445669.2-201ENST00000454425 421 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 RPL23AP42-201ENST00000471152 471 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 AC022616.2-201ENST00000523185 300 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 AC025423.2-201ENST00000537570 439 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 AC234775.3-201ENST00000564612 656 ntBASIC2.49□□□□□ -2.01
COL4A1P02462 RNU6-146P-201ENST00000384602 108 ntBASIC2.48□□□□□ -2.01
COL4A1P02462 RNU6-328P-201ENST00000390887 106 ntBASIC2.48□□□□□ -2.01
COL4A1P02462 U3.37-201ENST00000408528 213 ntBASIC2.48□□□□□ -2.01
COL4A1P02462 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A1P02462 AC005005.2-201ENST00000420779 380 ntBASIC2.48□□□□□ -2.01
COL4A1P02462 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A1P02462 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A1P02462 AP000852.1-201ENST00000472460 573 ntBASIC2.48□□□□□ -2.01
COL4A1P02462 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A1P02462 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.48□□□□□ -2.01
COL4A1P02462 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A1P02462 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A1P02462 AC011460.1-201ENST00000636268 1834 ntBASIC2.48□□□□□ -2.01
COL4A1P02462 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A1P02462 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.48□□□□□ -2.01
COL4A1P02462 AC080128.1-201ENST00000474389 1917 ntBASIC2.48□□□□□ -2.01
COL4A1P02462 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A1P02462 DYNLT3P1-201ENST00000378574 347 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AL358453.1-201ENST00000422522 250 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A1P02462 AC243772.1-201ENST00000451620 410 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 CFTRP1-201ENST00000456646 183 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 SNORD13-201ENST00000459299 104 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AP002371.1-201ENST00000463604 433 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 MTAPP1-201ENST00000489154 819 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 GZMAP1-201ENST00000503054 631 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A1P02462 HIGD1AP10-201ENST00000527837 282 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A1P02462 AC011611.5-201ENST00000552477 578 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A1P02462 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AC016727.1-205ENST00000605437 569 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AL627309.6-201ENST00000606857 840 ntBASIC2.47□□□□□ -2.01
COL4A1P02462 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A1P02462 AC093673.2-201ENST00000609674 331 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms