Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-897P-201ENST00000517135 105 ntBASIC6.31□□□□□ -1.4
ALDH1A1P00352 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.31□□□□□ -1.4
ALDH1A1P00352 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.31□□□□□ -1.4
ALDH1A1P00352 DUX4L52-201ENST00000549363 777 ntBASIC6.31□□□□□ -1.4
ALDH1A1P00352 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.31□□□□□ -1.4
ALDH1A1P00352 AC005341.1-201ENST00000571086 708 ntBASIC6.31□□□□□ -1.4
ALDH1A1P00352 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.31□□□□□ -1.4
ALDH1A1P00352 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.31□□□□□ -1.4
ALDH1A1P00352 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ALDH1A1P00352 AC005618.1-201ENST00000606901 3148 ntBASIC6.31□□□□□ -1.4
ALDH1A1P00352 SNX18P3-202ENST00000565670 1750 ntBASIC6.31□□□□□ -1.4
ALDH1A1P00352 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
ALDH1A1P00352 AC009313.2-201ENST00000417893 1941 ntBASIC6.31□□□□□ -1.4
ALDH1A1P00352 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALDH1A1P00352 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALDH1A1P00352 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALDH1A1P00352 AL122126.1-201ENST00000546905 1318 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 NXPH1-205ENST00000602349 1953 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 MFSD8-239ENST00000641590 2479 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALDH1A1P00352 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALDH1A1P00352 RNU6-97P-201ENST00000363387 104 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 RNU1-85P-201ENST00000364127 164 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 RNU4-42P-201ENST00000364738 142 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 RNU6-842P-201ENST00000384269 107 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 MIR649-201ENST00000384843 97 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 RNU6-550P-201ENST00000391057 101 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC108032.1-201ENST00000416706 207 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 RNF10P1-201ENST00000418589 369 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 RPL31P45-201ENST00000419532 356 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AL590233.1-201ENST00000430017 456 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 UBE2V1P13-201ENST00000436983 439 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 HMGB1P4-201ENST00000455362 567 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 Z92846.1-201ENST00000456203 268 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 LINC01399-202ENST00000458450 244 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC021382.1-201ENST00000483523 359 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC026801.1-201ENST00000497178 464 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 SNORA14.1-201ENST00000516113 141 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 HMGN2P28-201ENST00000606102 262 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC004832.4-201ENST00000608952 331 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AC093799.2-201ENST00000610062 578 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AL161616.1-201ENST00000611867 286 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 AP001282.2-201ENST00000616149 309 ntBASIC6.3□□□□□ -1.4
ALDH1A1P00352 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALDH1A1P00352 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
ALDH1A1P00352 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ALDH1A1P00352 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 RNU6-493P-201ENST00000391321 108 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 DDX18P3-201ENST00000404856 2007 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
ALDH1A1P00352 RPLP0P7-201ENST00000416050 667 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 RPL23AP69-201ENST00000431134 458 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 RPL12P17-201ENST00000432393 498 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 AL596266.1-201ENST00000448132 400 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 snoU13.20-201ENST00000459180 104 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 SOD1P3-201ENST00000518682 454 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ALDH1A1P00352 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 AC067852.5-201ENST00000589299 310 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 AC006115.2-201ENST00000596823 202 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 HSPE1P14-201ENST00000605812 302 ntBASIC6.29□□□□□ -1.4
ALDH1A1P00352 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ALDH1A1P00352 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ALDH1A1P00352 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ALDH1A1P00352 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ALDH1A1P00352 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ALDH1A1P00352 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ALDH1A1P00352 AC027287.1-201ENST00000553115 1453 ntBASIC6.28□□□□□ -1.4
ALDH1A1P00352 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.28□□□□□ -1.4
ALDH1A1P00352 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ALDH1A1P00352 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ALDH1A1P00352 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ALDH1A1P00352 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms