Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RPL31P2-201ENST00000413849 377 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 Z99497.1-201ENST00000421282 135 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 UBE2FP3-201ENST00000436366 524 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC092427.1-201ENST00000439177 601 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN1O95832 RPL39P6-201ENST00000448289 150 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 TRBV26-201ENST00000456572 344 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 TPTE2P5-203ENST00000458118 728 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 RPS15AP17-201ENST00000470598 390 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC109486.1-201ENST00000486833 374 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN1O95832 AC092045.1-201ENST00000495716 1231 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN1O95832 HMGB1P21-201ENST00000502313 581 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN1O95832 MTCYBP17-201ENST00000503579 789 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN1O95832 MTCO3P28-201ENST00000513351 515 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 RN7SKP82-201ENST00000516786 223 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 IGKV2-38-201ENST00000517443 247 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN1O95832 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN1O95832 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 AGGF1P8-201ENST00000562979 1000 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN1O95832 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN1O95832 AP001180.3-201ENST00000582221 145 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 MIR5187-201ENST00000583479 76 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 AC010680.4-201ENST00000605334 543 ntBASIC3.41□□□□□ -1.86
CLDN1O95832 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CLDN1O95832 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN1O95832 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN1O95832 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN1O95832 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN1O95832 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN1O95832 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN1O95832 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN1O95832 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDN1O95832 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN1O95832 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN1O95832 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CLDN1O95832 NOL8P1-201ENST00000508336 3529 ntBASIC3.4□□□□□ -1.86
CLDN1O95832 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN1O95832 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.4□□□□□ -1.86
CLDN1O95832 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN1O95832 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN1O95832 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN1O95832 RNA5SP50-201ENST00000363731 107 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 Y_RNA.302-201ENST00000364997 102 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 SNORA51.6-201ENST00000384151 125 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 RNU6-253P-201ENST00000384730 105 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 MIR124-3-201ENST00000384866 87 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AL023807.1-201ENST00000407932 359 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 MIR1289-1-201ENST00000408836 144 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 PGBD4P8-201ENST00000412993 562 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN1O95832 BX119904.4-201ENST00000424402 301 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AC098826.1-201ENST00000433943 471 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN1O95832 VN1R10P-201ENST00000447106 875 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN1O95832 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN1O95832 AC010301.1-201ENST00000473936 355 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN1O95832 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN1O95832 OR4G11P-201ENST00000492842 939 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AC114981.1-201ENST00000503897 678 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 RNA5SP216-201ENST00000516111 123 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 RNU7-143P-201ENST00000516781 65 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AC087276.1-201ENST00000529659 480 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN1O95832 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN1O95832 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN1O95832 HSPE1P3-201ENST00000559254 309 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN1O95832 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN1O95832 AC012417.1-201ENST00000582307 1039 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 MIR4637-201ENST00000582405 84 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN1O95832 AC104662.1-201ENST00000604448 511 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AC113194.1-201ENST00000606037 500 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN1O95832 AC243773.3-201ENST00000613270 256 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 MIR7844-201ENST00000616161 122 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 AL359715.5-201ENST00000623431 443 ntBASIC3.4□□□□□ -1.87
CLDN1O95832 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN1O95832 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN1O95832 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN1O95832 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN1O95832 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms