Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC020910.3-201ENST00000603701 874 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AL031320.1-201ENST00000604177 357 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 IMMP1LP3-201ENST00000604197 224 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AL132822.1-201ENST00000617063 513 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 AC010378.1-201ENST00000619270 362 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 AC098657.3-201ENST00000620434 263 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.37□□□□□ -1.55
CPNE3O75131 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.37□□□□□ -1.55
CPNE3O75131 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.37□□□□□ -1.55
CPNE3O75131 MTND5P1-201ENST00000445440 1375 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.37□□□□□ -1.55
CPNE3O75131 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.37□□□□□ -1.55
CPNE3O75131 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CPNE3O75131 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CPNE3O75131 AC097063.1-201ENST00000426714 1797 ntBASIC5.37□□□□□ -1.55
CPNE3O75131 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.36□□□□□ -1.55
CPNE3O75131 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 AP001029.2-203ENST00000589795 4910 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 STX3-208ENST00000641815 3236 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 RNU6-562P-201ENST00000362731 107 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 RNU6-593P-201ENST00000364716 112 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 SNORA23-201ENST00000365128 182 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 Y_RNA.399-201ENST00000383955 105 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CPNE3O75131 RNU6-1106P-201ENST00000390845 107 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 SNORA11B-201ENST00000408175 129 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.36□□□□□ -1.55
CPNE3O75131 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.36□□□□□ -1.55
CPNE3O75131 FAR2P4-202ENST00000425399 584 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 AL358176.2-201ENST00000425769 204 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 HMGN2P27-201ENST00000427352 270 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 FABP7P2-201ENST00000429946 379 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 CFL1P1-202ENST00000432948 411 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 AC004866.2-201ENST00000438285 481 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.36□□□□□ -1.55
CPNE3O75131 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.36□□□□□ -1.55
CPNE3O75131 RNU7-167P-201ENST00000459160 62 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.36□□□□□ -1.55
CPNE3O75131 RNU6-976P-201ENST00000516086 111 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 RNU6-1095P-201ENST00000516148 108 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 RNA5SP34-201ENST00000516887 130 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 RNU6-1213P-201ENST00000517075 94 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.36□□□□□ -1.55
CPNE3O75131 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.36□□□□□ -1.55
CPNE3O75131 DYNLL1P4-201ENST00000549314 266 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.36□□□□□ -1.55
CPNE3O75131 AC009852.2-201ENST00000567898 485 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.36□□□□□ -1.55
CPNE3O75131 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.36□□□□□ -1.55
CPNE3O75131 MIR5692C1-201ENST00000585309 91 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 NANOGP3-201ENST00000605855 286 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 AC004696.1-201ENST00000614345 607 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 FAM157A-202ENST00000615155 405 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 AL450472.3-201ENST00000615578 367 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 U73479.1-201ENST00000618062 168 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 MIR6837-201ENST00000620884 64 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 AL669831.3-213ENST00000636676 183 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 AC079776.5-201ENST00000641920 211 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 MTND4P1-201ENST00000457501 1466 ntBASIC5.36□□□□□ -1.55
CPNE3O75131 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CPNE3O75131 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.36□□□□□ -1.55
CPNE3O75131 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CPNE3O75131 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.36□□□□□ -1.55
CPNE3O75131 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CPNE3O75131 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPNE3O75131 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPNE3O75131 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CPNE3O75131 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
CPNE3O75131 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.35□□□□□ -1.55
CPNE3O75131 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPNE3O75131 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CPNE3O75131 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CPNE3O75131 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CPNE3O75131 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CPNE3O75131 RNU6-1309P-201ENST00000363305 108 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 RNU6-1155P-201ENST00000363554 107 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CPNE3O75131 AC117470.1-201ENST00000381974 330 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 RNU6-434P-201ENST00000384376 107 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 AC110754.1-201ENST00000399740 601 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 AC009804.1-201ENST00000400949 179 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 Y_RNA.646-201ENST00000410980 101 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 AC016769.2-201ENST00000414815 475 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 RPLP0P7-201ENST00000416050 667 ntBASIC5.35□□□□□ -1.55
CPNE3O75131 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.35□□□□□ -1.55
CPNE3O75131 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms